Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1421 ATGGCAGAGAAGGCCAACGGCAGCGGGGTCTACgtggaagaagaagatgaagaagaagtgAAATTAAAACAGAGAAAGGGAAGGGTGAAAGAGACCTTGCCGGAGGTTCTCAACCGCATCGCTTCCGCCATTCTCTTCCCGGAACCCAGCGAAGATGGATCCCTACTTCGCCGGATCAAGGTCTCCGTCGCCGACAACGCTCCTCTCCTTCCGGAAGCTTCCAGAAACTCCGCCCGCGACGTTATCCTCTGGACTCGCCGCGGCACCCCCTTCCGCGCCCTCTTCGTCATCTCTGTTGGGACGGTTGCATTTGTTGCTTTTACAGGACTGCTTGTATTTATGCTTTTCTTTCTGGTTGCGACCATAAATGCCGTTGTCATATTGCTGCTGATGTCTTTGGCAGCTGCAGGAGGATTCTTGGctcttttctttacttttgttACAGCTATATACATTGGAGCATTATCAGTTGCCATATTTGCTATTTCCGTTACCACATTTTGGGCAATTGTGGCTATTCTGATAATCACAGGCTGGATTGGATTTATTTATACTGGTGTGGCTGGTAACTAG 573 0.4642 MAEKANGSGVYVEEEDEEEVKLKQRKGRVKETLPEVLNRIASAILFPEPSEDGSLLRRIKVSVADNAPLLPEASRNSARDVILWTRRGTPFRALFVISVGTVAFVAFTGLLVFMLFFLVATINAVVILLLMSLAAAGGFLALFFTFVTAIYIGALSVAIFAISVTTFWAIVAILIITGWIGFIYTGVAGN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1421 190 PANTHER VOLTAGE-DEPENDENT L-TYPE CALCIUM CHANNEL SUBUNIT 15 185 - -
Ssu9g1421 190 PANTHER VOLTAGE-DEPENDENT L-TYPE CALCIUM CHANNEL SUBUNIT 15 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1421 Ssu-Chr9 49223558 49226041 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1421 - - gmx:100799172 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1421 9 49223558 49226041 Ssu6g2843 6 65942155 65944007 PCT