Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2843 ATGGCGGAGAAGCCGATTAGAGAAGAAGTGAAGGAGACAACAAAGGAGAACCTGTACGACGTCGTTCACCGTCTCATCTTCGAACCTTCTAAGATCAAGGCCTCCCTCGTCCCTCTATTCCCCGAAGCTTCTAGAAACTACTCTCGCCACCTTCTTCTCTGGTCTCGTCAAGGCTCTCCCCTCCGACGCCTCCTCTTCATCTCTGTTGGGATAGTTGCTCTTGTTGCTCTGTCAGGACTTGTTGTCTTTACGCTCTTCTTTCTGGCTGCAACTATAAATGCCATTTTCGTCTCCCTTCTAATTTCTTTGGCAGTGGCTGGGGGGTTCTTGGCTCTATTCTTTGCTTTTGTGACAGCTATGTATATTGGAGCACTATCAGTGGCCATATTTGCTATTTCCACTATTACTTTTTGGGCTGTTGTGGCTATCGTTATTACTGCAGGATGGGTTGGATTCTTTTATACTGTGTGGCTGGTAACTAGAAAGAGCCTTGGATTTGCAAAGCAATCTTTGAGTGTGACTGGCTCTGCAATTACTACTTACTCTGCTGCTTGGGGTACCCGCAACCTTCCACACAAAGGTTCAATTTAG 591 0.4653 MAEKPIREEVKETTKENLYDVVHRLIFEPSKIKASLVPLFPEASRNYSRHLLLWSRQGSPLRRLLFISVGIVALVALSGLVVFTLFFLAATINAIFVSLLISLAVAGGFLALFFAFVTAMYIGALSVAIFAISTITFWAVVAIVITAGWVGFFYTVWLVTRKSLGFAKQSLSVTGSAITTYSAAWGTRNLPHKGSI 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2843 196 PANTHER PROTEIN, PUTATIVE-RELATED 1 196 - -
Ssu6g2843 196 PANTHER VOLTAGE-DEPENDENT L-TYPE CALCIUM CHANNEL SUBUNIT 1 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2843 Ssu-Chr6 65942155 65944007 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2843 - - gmx:100306640 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1421 9 49223558 49226041 Ssu6g2843 6 65942155 65944007 PCT