Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1362 ATGTCAGATCATCAAAGAATTCATCCTGCTCATGATGTGGAGGCACCACACAGACCTTTGGTGCCCGGAAACATTGCTAAATCTGATAGGGGTCCTCCTCGGCGCACCTTTCCTGTGATTCATTCCAAGCCACCTAAGAAAAGAAGCTGTTGCTGCAGGTTCCTGTGTTGGACATTTAGCATGTTACTGATTTTGATAATTGCTATAGCCATCACAATTGGGATCCTGTACCTTGTGTTTAGGCCAAAGCTTCCCAAATACTCAGTGGACCAACTGAGAATAAGCCAGTTCAATGTTTCAGACAACAACAACCTCTATGCCTCCTTCAATGTGACAATTACTGCAAGAAACCCAAATAAGAAGATTGGTATATACTATGAGGGTGGAAGCCACATAAGTGCTTGGTACATGGACACACAATTGTGTGAAGGGTCTTTGCCAAAGTTCTACCAGGGTCACAGGAACACCACAGTGCTTGATCTGCCTCTGACGGGTCAAGCACAGGATGCAAGTGGCCTACAAACTAGACTTCAGGATCAACTGCAACAGACCAACAATATTCCCCTCAATCTTAAGGTTAATCAGCCTGTGAGGGTTAAGCTTGGAAAGTTAAAGCTCTTCAAAGTCAAGTTCAGGGTTAGGTGCAGGCTTGTGGTGGATAATATTCTTGGTGCTAGTAATGATATTAGAATTTCGAGCAGTAGATGTAAGTTCAGGCTTAGGCTATGA 729 0.439 MSDHQRIHPAHDVEAPHRPLVPGNIAKSDRGPPRRTFPVIHSKPPKKRSCCCRFLCWTFSMLLILIIAIAITIGILYLVFRPKLPKYSVDQLRISQFNVSDNNNLYASFNVTITARNPNKKIGIYYEGGSHISAWYMDTQLCEGSLPKFYQGHRNTTVLDLPLTGQAQDASGLQTRLQDQLQQTNNIPLNLKVNQPVRVKLGKLKLFKVKFRVRCRLVVDNILGASNDIRISSSRCKFRLRL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1362 242 Pfam Late embryogenesis abundant protein 112 216 IPR004864 -
Ssu9g1362 242 PANTHER EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN, PUTATIVE-RELATED 37 240 - -
Ssu9g1362 242 SUPERFAMILY LEA14-like 65 197 - -
Ssu9g1362 242 MobiDBLite consensus disorder prediction 1 36 - -
Ssu9g1362 242 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 37 240 - -
Ssu9g1362 242 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1362 Ssu-Chr9 48108179 48108907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1362 4 242 EF-hand Containing Proteins AT5G21130 25.097 2.54e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1362 - - gmx:100781699 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1362 9 48108179 48108907 Ssu6g2805 6 65125851 65126615 PCT