Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1139 ATGAAAAGAGAAGTTTCAACAACTGACAGCTCCCCATTATTGGAGACCCAATATGCAGAATACCATGTCGAAAGAACTGGGACAGTGTGGACTGCAGTGGCACACATAGTGACAGGAGTGATAGGGTCAGGAGTGTTGTCTTTGGCTTGGAGCATTGCACAGCTTGGATGGATTGGAGGGCCATTAACAATTCTTTTCTTTGCTTCCATCACTCTCCTCTCTGCTTTCCTTCTTAGCAACACATATCGTTCTCCAGACCCTGAACACGGTCCTCGAAGGAGCTCCTCATACCTTGATGCTGTTAATTTACATAAGGGAGAAGGGAATAGTCGCTTCTGTGGTGTTTTTGTGAACGTAAGCTTATATGGTTTTGGAATTGCTTATGTCGTTACCGCTGCTATCAGTTTGAGAGCAATCCAAAAATCAAACTGTTACCACGGCAAAGGGAATGAAGCAACATGTGGATTTAACGATGCATATTTCATGCTTATTTTTGGGGCTATCCAAGTTGTTCTCTCACAGATACCCAACTTCCATAATATTCAATGGTTGTCAATTCTCGCAGCAATTACGTCCTTTGCTTATGCTTTCATAGGAATGGGGCTTTCCGCCGCGCAAGTCGCAGAAAATGGACATGCTGAGGGTAGCATTGAAGGGATCCCTACTTCCAGTGGAATTGAAAAATTATGGCTGATTGCTCAAGCACTTGGTGACATAGCATTCTCCTATCCATTCTCAGTAATTCTTATTGAAATACAGGATACTTTGAAGTCGCCTCCACCAGAAAACCAAACCATGAAGAAGGCCTCAACAATATCAGTCATTGTCACAACATTTTTCTACCTCTGTTGTGGGTGTTTTGGATATGCAGCCTTTGGTAATGATACCCCAGGAAACCTTTTAACAGGGTTTGCACTCTATAAACAACATTGGCTTGTAGACTTTGCTAATGCTTGTATAGTGATTCACCTAGTTGGTGCATATCAGGTGTATAGCCAGCCCCTTTTTGCCAATGTTGAGAATTGGCTTCGTTTCAACTTCCCAGACAGTGAATTTGTGAATCACACATACTTCTTGAAACTCCCATTGCTGCCAGCTTTCCCACTAAATTTTCTCAGGCTTTCTTTCAGAACTGCATACGTTGCATCAACGACTGTGATTGCAATGATCTTTCCTTACTTCAATCAGATTTTGGGAGTTTTGGCTGGCATAATCTATTATCCGTTGACCATATATTTTCCAGTGGAAATGTACTTGAGTCAGGGCAATATCGAAGCATGGACGACTAAGTGGGTCATGCTTAGGACTTTTAGCATTGTTGGTTTGATGGTGGGACTGTTCACTCTCATTGGATCCATTGAAGGGATAGTATCTGCAAAACTAAGCTAA 1389 0.4226 MKREVSTTDSSPLLETQYAEYHVERTGTVWTAVAHIVTGVIGSGVLSLAWSIAQLGWIGGPLTILFFASITLLSAFLLSNTYRSPDPEHGPRRSSSYLDAVNLHKGEGNSRFCGVFVNVSLYGFGIAYVVTAAISLRAIQKSNCYHGKGNEATCGFNDAYFMLIFGAIQVVLSQIPNFHNIQWLSILAAITSFAYAFIGMGLSAAQVAENGHAEGSIEGIPTSSGIEKLWLIAQALGDIAFSYPFSVILIEIQDTLKSPPPENQTMKKASTISVIVTTFFYLCCGCFGYAAFGNDTPGNLLTGFALYKQHWLVDFANACIVIHLVGAYQVYSQPLFANVENWLRFNFPDSEFVNHTYFLKLPLLPAFPLNFLRLSFRTAYVASTTVIAMIFPYFNQILGVLAGIIYYPLTIYFPVEMYLSQGNIEAWTTKWVMLRTFSIVGLMVGLFTLIGSIEGIVSAKLS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1139 462 Pfam Transmembrane amino acid transporter protein 25 456 IPR013057 -
Ssu9g1139 462 Gene3D Amino acid/polyamine transporter I 23 337 - -
Ssu9g1139 462 PANTHER OS05G0424000 PROTEIN-RELATED 13 461 - -
Ssu9g1139 462 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 13 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1139 Ssu-Chr9 43267355 43271143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1139 24 444 Organic Solute Cotransporters AT1G77380 51.300 2.37e-158 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1139 K24917 - gmx:100801302 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1139 9 43267355 43271143 Ssu6g3623 6 79933488 79936120 PCT