Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1101 ATGATCAGATATAGGAGATTAACCCATTTTGATGTTGAGACATTTGTTGAAGAAGTTCTTGTCAAGGAAGGAGAATGGCTTCCTGGAAATCCTGAATCCTTAAAAGGTTCATATGTTTTTGTGTGTTCACATGGATCCCGTGATCGTAGGTGTGGGGCTTTTGGACCTATCTTGGTCAGTAGATTCAGGGAAGAGATAGAGTTACATGGTCTTCAAGGTAAAGTGTTGATTAGCTCTTGCTCGCATATTGGGGGGCACAAGTATGCAGGAAATGTCATTATAtttggatcaagcatcaacggAGAAGTCACTGGGCACTTGTATGGATATGTTAATCCAGATGATGTACCGTTATTGTTTCGCCAGCATATCATTAAAGGGGAGATTTTTGACTCACTGTGGAgGGGTCAAATTGGTTTATCAGAAGATGAACAGAAGAAAAAGCAAGAACAAAGGCTTCAGCTGAATGGTGCAAGACATTTAGAAGGAAGCACGGGGGCAGGCCGCTGTCAAACAGACGGAGAGAGCTGTTGCCAAGACAATGGAGACTCCTGTTGCTGTCAGAACGATGCATTAGTGGAAATGAGAGACATCTCGGCTGATAATAAGGACAGGGAGAACGTGAATGGGATTTCTCGGATCAACAAGGGCAAGGGAGCCTTACGCAAGTTTAGTTCCGTGCCGACATGGCTTGACAGCTGGGAGCAAGAAGATACTTATGCTGCTCTTGCTGTTGTTTGCGCTGCCGTGTCCGTTGCCATCGCCTATAGCTGCTACAAACAGCTGAGATAA 792 0.4356 MIRYRRLTHFDVETFVEEVLVKEGEWLPGNPESLKGSYVFVCSHGSRDRRCGAFGPILVSRFREEIELHGLQGKVLISSCSHIGGHKYAGNVIIFGSSINGEVTGHLYGYVNPDDVPLLFRQHIIKGEIFDSLWRGQIGLSEDEQKKKQEQRLQLNGARHLEGSTGAGRCQTDGESCCQDNGDSCCCQNDALVEMRDISADNKDRENVNGISRINKGKGALRKFSSVPTWLDSWEQEDTYAALAVVCAAVSVAIAYSCYKQLR 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1101 263 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 1 262 IPR009737 -
Ssu9g1101 263 Gene3D Glutaredoxin 36 136 - -
Ssu9g1101 263 Pfam Sucrase/ferredoxin-like 4 136 IPR009737 -
Ssu9g1101 263 CDD TRX_Fd_Sucrase 36 138 IPR009737 -
Ssu9g1101 263 PANTHER SUCRASE-LIKE PROTEIN 1 262 - -
Ssu9g1101 263 SUPERFAMILY Thioredoxin-like 38 140 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1101 Ssu-Chr9 42620744 42623177 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1101 - - gmx:100788716 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1101 9 42620744 42623177 Ssu9g1101 9 42620744 42623177 ECH
Ssu9g1101 9 42620744 42623177 Ssu6g3583 6 79454405 79457182 PCT