Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3583 ATGGCGAGtaacagagagagagaagattcgCTGACATTCACAAtcccttcttcctcttcccATTCTTCCCCCATCACCGTCTCCGACCAACTCGACAGCTACCTCACCGACCCCAGAAGCGCCTCCGGAAGCTTCCAGAACGAGGGCCTTCTCTCCGCCGGAGAAGCCGCCGCAGCCGATCCCGACTTCGGATTCTCCCGCCCCGATTTCCGCCAGAGCCCCCTCGCCGGCACCGTCGAGTTCTACCAACGCCACGTCTTCCTCTGCTACAAGAACCCTCGCGTTTGGCCACCCCGCATAGAGGCCGCGGAGTTCGATCGCTTGCCAAGGCTGCTCTACGCCGCCGTTGTCGCAAGGAAGAGTCACATGAAAAAGGAGACTCGGTTAACGATTTGTGAGGGTCATGATGGGACTGAGACATCTAATGGGGATGTGTTGATCTTCCCTGACATGGTTAGATACAGGAGGTTAACGCATTTTGATGTTGAAACGTTTGTTGAAGAGGTTCTTGTGAAGGATGGGGAGTGGCTTCCCGGAACCCCAGAGGCGTTGAAAGGTTCCTATGTTTTTGTGTGTTCACATGGATCCCGTGATCGCAGATGTGGGGTTTGTGGACCTGCCTTGGTCAGTAGATTCAGGGAGGAGATAGAGTTGCATGGCCTTCAAGGTAAAGTGTTTGTAAGCCCGTGCTCACACATTGGGGGATCTCAGTACGCAGGAAATGTCATTGTATTTGGACCTAGCATGAATGGAGAAGTCACTGGGCACTGGTATGGATATGTTACCCCGGATGATGTACCTTTATTGCTTCAACATCATATCGTAAAAGGGGAGATTTTAGATTCATTATGGagGGGTCAGATGGGTTTATCAGAAAATGAACAGAATAAAAAGCGAGAACAGAGGCTTCTGCTGAATGGCTTAAGAGATTTAGAAGAAAGCACTCAAGTGTGTAGATCTCAAGACAATTTTGTGAGCTGCTGCCAATCAAATGGAGTTGGCTGCTGCCAATCAAATGGAGACTCTTCTTTCCGTCAGAATCATGTGTTAGTGGACAAGAGAAACGACCCTGATGTCATTGAGACGGAGGCAAAGATCTCAGCTGATAATAAGAGCAGTGAGACTGTGCTTTCTCGGATCAGTAGTAGCAAAGGAGCTTTGCGAAAGTTTCCTTCCATGACAACTTGGCTTGATGGCTGGGAGCAAGAAGATACTTATGCAGCTCTTGCTGTTGTCTGTGCTGCTGTGTCAGTTGCCATTGCCTATAACTGCTACAAACAATTGAGATAA 1290 0.4783 MASNREREDSLTFTIPSSSSHSSPITVSDQLDSYLTDPRSASGSFQNEGLLSAGEAAAADPDFGFSRPDFRQSPLAGTVEFYQRHVFLCYKNPRVWPPRIEAAEFDRLPRLLYAAVVARKSHMKKETRLTICEGHDGTETSNGDVLIFPDMVRYRRLTHFDVETFVEEVLVKDGEWLPGTPEALKGSYVFVCSHGSRDRRCGVCGPALVSRFREEIELHGLQGKVFVSPCSHIGGSQYAGNVIVFGPSMNGEVTGHWYGYVTPDDVPLLLQHHIVKGEILDSLWRGQMGLSENEQNKKREQRLLLNGLRDLEESTQVCRSQDNFVSCCQSNGVGCCQSNGDSSFRQNHVLVDKRNDPDVIETEAKISADNKSSETVLSRISSSKGALRKFPSMTTWLDGWEQEDTYAALAVVCAAVSVAIAYNCYKQLR 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3583 429 MobiDBLite consensus disorder prediction 1 40 - -
Ssu6g3583 429 CDD TRX_Fd_Sucrase 186 288 IPR009737 -
Ssu6g3583 429 Gene3D Glutaredoxin 186 286 - -
Ssu6g3583 429 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 60 428 IPR009737 -
Ssu6g3583 429 SUPERFAMILY Thioredoxin-like 188 290 IPR036249 -
Ssu6g3583 429 Pfam Sucrase/ferredoxin-like 75 286 IPR009737 -
Ssu6g3583 429 PANTHER SUCRASE-LIKE PROTEIN 60 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3583 Ssu-Chr6 79454405 79457182 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3583 - - gmx:100816329 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3583 6 79454405 79457182 Ssu6g3583 6 79454405 79457182 ECH
Ssu9g1101 9 42620744 42623177 Ssu6g3583 6 79454405 79457182 PCT