Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1100 ATGGTGGCAAAAATCCGGCAAAGTGCTACTGAGTCTCCTAATCCAAAACCTGAGGTTGGAGAGATTGACACCAGCCCACCTTTTCAGTCTGTTAAAGATGCTGTCTCTCTATTTGGTGAAGGTGCTTTCTCTGGTGAAAAACCTTTCTTTAAGAAGGCAAAGCCTTATTCTGCTGAGAGAGTTTTGGCAAAGGAGACACAACTTCATGTAGCCCAAAAAGAGCTGAACAAGTTAAGGGAACAAGTAAAGAATGCTGAAACTACAAAGGCTCAAGCTCTTGTGGAGCTTGAAACAGCTAAAAGGACAGTTGAGGATCTGACACAAAAGATAAAAGTTATCAGTGAATCTAGGGAGTTAGCAATCAAGGCAACAGAAGCTGCAAAGAGTCAGGCAAAGCAACTTATGGAAGAAAAGTATGGTGCCCCTGACATTGACATAacaaatggtgcttggaaggaaGAGTTAGAAGCTGCAGTTAAAAGGTATGGATCTGTCATGACAGAACTTGATGCTGCAAAACAAGAACTGAGCAAGACTCGGCAAGAGTATGATTCATCCTTGGATGCAAGAGAGTCTGCTTTCAAGCAAGCAGCAGAAGCTGGAGTTGCAATGAAGGAAAGCAAAGCAAGAGCATCTGAGCTTTCTAAAGAAATTTCAGCTGTAAATGAGTCAATTGAGCAAGCGAAGCTTGCATCTATCGTAGCACAGCAACAGCAAGCAATGATTTTAGCTGAGAAAGATGTTCTAAGACAGTCATATAAAGCTACCCTTGAACAATCTGAAAAGAAATTGCTTGCTTTAAAGAAGGAATTCAGTCCTCAGCTAGCCAAAAATCTTGAAATGCAGCTGGCTGAGACAGTGAGTGAAATTGGGGCTCTGCAAAaggaaatggaaaataaaaggaCTTCGGACTTGGACTCTGTGAAAAGTGTCACTTTGGAGCTTGATGATGCTAAGGGGTCACTGCAGAAAGTAGCAGATGAGGAAAGCTCTCTTAGAAGCTTGGTGGAAACTCTTAAGGTAGAACTAGAGAATGTAAAAAGAGAACATTCTGAATTGAAGGAGAAAGAATCTGAAACTGAATCCATTGTTGGGAATCTGCACGTCAAGCTCCGCAAAAGCAAGTCTGAGCTTGAAACCTGCATGGCCGAAGAATCTAAAGTTAGAGGTGCATCTGAGGAAATGATCTTGACGCTTAGCCAGCTGACATCTGAAACTGAAAATGCAAGGCAGGAAGCAGAAGATATGAAGAACAAGACAGCAGAATTGAAGAAGGAAGCTGAAGTTACCATGCTTGCATTAGAAGAAGCAGAGAAAAAGCTTAAAGTGGCTCTGGAAGAAGCAGAAGCAGCAAAAGCAGGCGAGGCAAGCGCTCTTGACCAGATTACAGTGTTAACCGAAAGGACTACTGCTGCACGTGCCTCAACATCTGAATCTGGTGCTGTGATTACAATCTCAAAGGAGGAGTTTGACTCACTAAGCCATAAAGTTGAGGAGTCTGATAAATTAGCAGACATGAAAGTGGCTGCTGCCAAGGCACAGGTTGAAGCTGTGAAGGCTAGTGAAAATGAGGCTCTCAAAAGGTTAGAGACAACTCAGAAGGAGATTGAGGATATAAAGAAAGCAACACAGGAGGCTTTGAAAAAGGCTGAAATGGCTGAAGCAGCAAAAAGGGCAGTGGAGAGTGAGCTTCGAAGATGGCGTGAGAGGGAGCAGAAGAAGGCTGCAGAAGCGGCGTCTCGCATTCTGGCTGAAACACAGGTGTCAACAGAATCATCTCCTCAGCACTATAAGATTCAAAAGCAGAATCCTCCTCGTCCAACAGTGGAGGTGAAGAAATTTGAAAAGGAGAAGGTTTCACTTTCAAAGAAAGCCCTTTTGCCTAATATTAGTGGCATCttccaaaggaagaaaaatcaGATTGAGGGTGGTTCTCCTTCTTACCTGCCTGGTGAGAACCCTGTATGA 1968 0.4217 MVAKIRQSATESPNPKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGEKPFFKKAKPYSAERVLAKETQLHVAQKELNKLREQVKNAETTKAQALVELETAKRTVEDLTQKIKVISESRELAIKATEAAKSQAKQLMEEKYGAPDIDITNGAWKEELEAAVKRYGSVMTELDAAKQELSKTRQEYDSSLDARESAFKQAAEAGVAMKESKARASELSKEISAVNESIEQAKLASIVAQQQQAMILAEKDVLRQSYKATLEQSEKKLLALKKEFSPQLAKNLEMQLAETVSEIGALQKEMENKRTSDLDSVKSVTLELDDAKGSLQKVADEESSLRSLVETLKVELENVKREHSELKEKESETESIVGNLHVKLRKSKSELETCMAEESKVRGASEEMILTLSQLTSETENARQEAEDMKNKTAELKKEAEVTMLALEEAEKKLKVALEEAEAAKAGEASALDQITVLTERTTAARASTSESGAVITISKEEFDSLSHKVEESDKLADMKVAAAKAQVEAVKASENEALKRLETTQKEIEDIKKATQEALKKAEMAEAAKRAVESELRRWREREQKKAAEAASRILAETQVSTESSPQHYKIQKQNPPRPTVEVKKFEKEKVSLSKKALLPNISGIFQRKKNQIEGGSPSYLPGENPV 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1100 655 Coils Coil 250 270 - -
Ssu9g1100 655 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 3 632 - -
Ssu9g1100 655 Coils Coil 329 363 - -
Ssu9g1100 655 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED 3 632 - -
Ssu9g1100 655 Coils Coil 61 116 - -
Ssu9g1100 655 Coils Coil 162 189 - -
Ssu9g1100 655 Coils Coil 399 454 - -
Ssu9g1100 655 Coils Coil 276 296 - -
Ssu9g1100 655 Pfam Weak chloroplast movement under blue light 21 573 IPR008545 -
Ssu9g1100 655 MobiDBLite consensus disorder prediction 1 27 - -
Ssu9g1100 655 Coils Coil 512 570 - -
Ssu9g1100 655 MobiDBLite consensus disorder prediction 576 608 - -
Ssu9g1100 655 MobiDBLite consensus disorder prediction 583 602 - -
Ssu9g1100 655 Coils Coil 204 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1100 Ssu-Chr9 42607980 42611464 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1100 - - gmx:100794569 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1100 9 42607980 42611464 Ssu9g1100 9 42607980 42611464 ECH
Ssu9g1100 9 42607980 42611464 Ssu6g3582 6 79448961 79451562 PCT