Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1099 ATGGGCAGCGTTGAGTACTCTCCATTGTTTGAGACACGAAGGAGCAGAGGAAGGCTCATCTACAGGTCCTTTGCAATCTCATTATTTGTGGCCATATGCTTCATATGGCTTTACAGATTTAGCCACAACATAATAGCCACAAAGGGTGAAGATGGAAAATGGGCATGGCTTGGTATGCTTGCTGCAGAGCTATGGTTTGGTCTTTACTGGGTCCTCACTCAAGCCTTAAGATGGAACCTTGTGTTCAGGCAACCCTTCAAAAATAGACTCTCTCAAAGATATGAGAAAAGGTTGCCAGGAGTGGACATCTTTGTGTGCACAGCAGACCCGGATATCGAGCCACCAATGATGGTGATTAATACAGTGCTATCTGTTATGGCTTATGACTATCCAAGTGAGAAGATGAGTGTGTATCTCTCTGACGATGCTGGGTCACAAATCACGTTCTATGCTCTGCTAGAGGCGTCAAACTTTGCAAAGCATTGGATTCCATTCTGCAAGAGGTTTAGGGTGGAGCCCAGGTCACCTGCTGCATATTTTAAGAGCATAGTCGCATCAGGTTACCCTACTGACCCTAGTCAAGCCAAAGAGTTGGCAGCCAGCAAGAAATTGTACGACAAAATGGAAAGACGCATTGAAAATGCAATCATGTTGGGTGAAGTACCCAAAGAAGCACGTCTAAAGCATAAGGGATTTTCTCAGTGGGATTCATATTCTTCTCGACGTGACCATGACACAATTCTTCAAATACTACTTCATAAAAAGGACCCTAATAATTCGAAAGATGTAGATGGGTTCATTTTGCCAACTCTGGTGTATCTAGCTCGCGAGAAGAGACCCCAATATTTCCACAACTTCAAAGCTGGAGCTATGAATTCATTGTTAAGGGTGTCTTCGAATATCAGCAACGGGAAAATCATTCTAAATGTAGATTGTGACATGTACTCAAACAATTCACAATCTGTGAGAGATGCTCTCTGCTTTTTCATAGATGAAGAGAAAGGCCATGAAATTGCTTATGTGCAGTTTCCTCAGATTTTTGAGAATGCCACTAAGAATGATATATATGGGTGTGCTCTAATATCAATTGCGGAGGTGGAGTTTCCTGGTGCGGATGGTTGTGGTGGCCCTTTGTATGTAGGAAGTGGCTGCTTTCACAAGAGAGAGTGTCTTTGTGGGATGAAGTTTAGTGATCAATATAGGAATGACTGGAATAGTGATGATGATCAGTTTAAAGAAGAAAGCTTGAAGGAACTAGAAGAACAATCAAAGGCTCTTGCAAGCTGCTCCTATGAGGAAAACACATTATGGGGAAAAGAGATAGGTTTAAAATATGGCTGTGTAGTGGAGGATGTGATAACAGGATTGTCTATACAGTGCCAAGGATGGAAATCAGTGTACTACAACCCACCAAGGAAGGCTTTCTTAGGTATAGCTCCAACTACCTTGCCTCAAACGCTTGTTCAGCATAAGAGATGGTCTGAAGGAGACTTACAAATTTTGCTTTCTAAATACAGCCCTGCATGGTATGGTTTTGGAAGGATCAGTTTGGGGCTCCAAATGGGATATTGTGTTTATTGCTTTTGGGCACCTAACTGTTTAGCAACACTATATTATTCTATCATCCCTTCATTATACCTCCTTAAAGGCATTCCTTTGTTTCCAAAGATATCAAGTCCTTGGTTCATACCTTTCGCATATGTCATTGTTGGGGAAACTACTTATAGTTTGTTGGAGTTTTTCTTCTGTGGAGGCACATTTCAAGGTTGGTGGAATGATCTACGAATATGGCTATACAAAAGAACAAGCTCCTACCTATTTGCTTGCATTGACACCATCTTGAAGCTTTTTGGGTTCTCAGATTCAACTTTTACAATCTCAGCTAAGGTTACTGAAGAAGATGCTTCCAAACGCCATGAGAAAGAAATAATGGAGTTTGGAACCTCCTCTCCAATGCTCACTATATTAGCCACTCTTGCaatgttcaatttattttgttttcttagtGTGATGAAGGATGCAATAGTCCTAAGGGAAGGTGACCTTGGAACTTATGAGACAATGGGGTTACAAGTTCTATTGTGTGGCTTTCTTGTTTTCATCAATTTGCCTATATATCAAGGACTTTTCATAAGGAAGGACAATGGAAGATTACCTAGCTCTATTGCCATCAAATCAATAGTATTGGCTCTAGGTGTATTCATCTTCTTCAGTTGGGCATGA 2223 0.4089 MGSVEYSPLFETRRSRGRLIYRSFAISLFVAICFIWLYRFSHNIIATKGEDGKWAWLGMLAAELWFGLYWVLTQALRWNLVFRQPFKNRLSQRYEKRLPGVDIFVCTADPDIEPPMMVINTVLSVMAYDYPSEKMSVYLSDDAGSQITFYALLEASNFAKHWIPFCKRFRVEPRSPAAYFKSIVASGYPTDPSQAKELAASKKLYDKMERRIENAIMLGEVPKEARLKHKGFSQWDSYSSRRDHDTILQILLHKKDPNNSKDVDGFILPTLVYLAREKRPQYFHNFKAGAMNSLLRVSSNISNGKIILNVDCDMYSNNSQSVRDALCFFIDEEKGHEIAYVQFPQIFENATKNDIYGCALISIAEVEFPGADGCGGPLYVGSGCFHKRECLCGMKFSDQYRNDWNSDDDQFKEESLKELEEQSKALASCSYEENTLWGKEIGLKYGCVVEDVITGLSIQCQGWKSVYYNPPRKAFLGIAPTTLPQTLVQHKRWSEGDLQILLSKYSPAWYGFGRISLGLQMGYCVYCFWAPNCLATLYYSIIPSLYLLKGIPLFPKISSPWFIPFAYVIVGETTYSLLEFFFCGGTFQGWWNDLRIWLYKRTSSYLFACIDTILKLFGFSDSTFTISAKVTEEDASKRHEKEIMEFGTSSPMLTILATLAMFNLFCFLSVMKDAIVLREGDLGTYETMGLQVLLCGFLVFINLPIYQGLFIRKDNGRLPSSIAIKSIVLALGVFIFFSWA 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1099 740 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 91 182 IPR029044 -
Ssu9g1099 740 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 244 407 IPR029044 -
Ssu9g1099 740 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 6 735 - -
Ssu9g1099 740 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN E1 6 735 - -
Ssu9g1099 740 SUPERFAMILY Nucleotide-diphospho-sugar transferases 116 551 IPR029044 -
Ssu9g1099 740 Pfam Cellulose synthase 423 733 IPR005150 GO:0016020|GO:0016760|GO:0030244
Ssu9g1099 740 Pfam Cellulose synthase 101 399 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1099 Ssu-Chr9 42577624 42583436 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1099 8 731 Glycosyltransferase AT1G55850 57.989 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1099 - - gmx:100815825 1355.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1099 9 42577624 42583436 Ssu9g1099 9 42577624 42583436 ECH
Ssu9g1099 9 42577624 42583436 Ssu6g3580 6 79418107 79432629 PCT