Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1032 ATGAGGCAAAAGACCAACAACGCAGATTCTAGTGGCTTCTTGGGAAGCATTTCTTCCAATTTTCTCAGATCAATCTCTTCTTCCAATCGCAAACCCACTTCTTGTTCTTCAAACCCCAAACCCCCAAAACCTGACGCTGAAAACACTCCCCCTACCCATCCAAACATTCCCTTAAACCACCACCGTCAATCAAAGCCCAACGCCCCATTTTCCCACACCGACTCACATGTGAAGGTTGTGGTGAGAATTAGGCCTGAAAATAGCAGTGGAAAAGAGGGGGATTGGAAAATTAAGAAGGTTTCTTCTGATGGCTTGTGTGTTGGGGACAGAACGTTCACGTTTGATGAAGTTTTTGATGCCAACTCCAATCAGGAAGATGTTTTTCAGTCAGTGGGTGTTCCCTTGGTTAGAAATGCTTTAGCTGGTTACAACACTACAATTCTGTCATATGGCCAGTCTGGAAGTGGAAAGACTTACACAATGTGGGGTACCCCAAGCGCCATGGTTGAGGAGCCCTTGCCTTCTAGTCATCAGGGAATTGTTCCTCGGATcatcaaaatgttattttctgAGCTTGAGAGAGAGAGACTTACGTCTGATCAGAAACAGTTCAACTATCAATGTCGTTGTTCAtttcttgagATATACAATGAACAAATTGGGAATTTAGTCAATCCTATCCAGCAGAACCTTGAGATGAAGAATGATTCCAGAAATGCACCATATATTGAGAATCTGATTGAGGAATACATCACTAACTATGATGAGGTGGCACAAATTCTGATTAAGGGCCTTTCAAGGAGAAAAAATGGAGCAACGAGCTTAAATTCTAATAGCTCCAGATCACATATAATTTTCACATTTGTTATTGAGTCTTTGTGTAAGGGAACCGCAAAGGGTTTCAGTAGCTCAAAAACTAGCAAAATCAGCCTTATTGATCTTGCTGGACTGGACAGGGATGAAGTTGATGATGGAGGTAGCCAATGTCCAAGGGAAAGCAAACATGTAGAGAAATCATTATCTCAGCTTGAGCATTTAGTGGATGCTGTGGCTAACAAATCTCGGTCTGGAAAAGATGAAGACATTCCACACAGTGACTCCTGTTTAACACGCTTACTGCGAGAATCACTTGGTGGAAGTGCCAAACTCTCAGTAATATGTTCCATCTCCCCTGATAGCAGGAGTAATGATGAAACACTGCGTACACTCAGATTTGGGGAGCAAGTAACATCCATTAGAAATGAGCCAGTTATCAATCTAATAAAGGTGGCTGATGTTGATTTGAGTAATAAAATCCGACACTTGAAGGAAGAACTTATTAGAGCAAAGGCTGATGTTCACAGCTCAGCTGGGAGTAAAGATGGATACTTCCAAGGACATATTGTGCGGGAAAGCCTGAATCAGATGAGAGTCAGCTTAAACCGCTCTCTTCTCCTATCTAACATGGATAGTGATACTGATGAGCATGTAGATGTCAATGAGGACGACATAAGGCAATTACGCCAGCAACTTGATGATTTGGATAGTTCATGTGAAGGGAATCCAAAAGACATATCTGTCAATGAAGATTGTGTCCAGTTTTATTCTGTTGAGGAAAAATGTGATGCAGGCACCACAAGTGGTGATGAAATTGAAAAGGCTGAGGTATGCTGTGGAAAAACATTGAGCAACCACTCAAGGGCAACTAAATCTACATTCAGTGATAGCATTTCAGTCAATTCATGCAATCAATCTCCAATACTTGCTGGACCACAGTTGTCTGAGTCTCCAAAATTCAGCAAAACTCAGAGGAAAAGTGTGGCTATTTCATCGAGTCATCTTGGAAGTTGGAACAATGTGGCAGAGAGTTCAACTTTCATTAACAATGTGTTAAGCAAACCATTTAAACAGGGTGAGCATGTGCAATCCTCATTACAGTCTAGCAAGGCTGAGTCCTTGGCAGCAAGCCTTCAGAAGGGATTACAGACTATTGACTATCACCAGCAGAACTCTGCATTGAACAAATCTTCAACTTCCTTCTCCTTTGAGCACTTAACTTTGACACCATGTCTAGAAATTGACAAGGTTGAATCTTGTGACCAAACAATACAACAGAAACCTTCCAGCGATGAAGTAACTGCTGCTTTCCTATGTGCATCTTGCCAGACCAAAATATCTAATCAGGATTCCACTGAGATTCAAGATAGCTTGAAATCCTGGTTTGAAAAATTTGGAAAAGCAGGAAATCGTGATGCAGTGACAGATAAAATTCCAAAACATGTGGAGAATGTAATAGCAAAAAGCATCATGAAAGAGAGGGAGCTTGAGAATGTTTGTAAGGAGCAAGCAGCTACAATTGAGCAACTAAATCAGTTGGTGGAGAAATTGAAAGGAGAGAAAGAACTTAACTCCGTTACTGTGTATGGTCAGTGTGAAGAGTATAACTCAAtgaaagatgaagaaaagCTTCTAAGGGGAATTTCCTCAAATGGTCATTTACCATGTATTATAGAggaaaaatgtgaaattaaagAAGTCCAGGAAGAGTTAGCCCAAAGAGATGtctcttttgattcaaatgaGAAGGAATCACTTCTTAAGGAAATTCAGAATCTAAGGAGCAAGCTGCAATTACATAGTGATACACCAGTTAAAAGGTCTACAGACAAACTAAGGTCTTCTTTGGTGTCAAGATCCATACAACTGCAAAAAAGTGGTGTATTTTCTTATGATAACGGCAATGAAGAGCTAGAGAATGAAAGACAAAGATGGACAGAAATGGAAAGTGAGTGGATTTGTCTCACTGATGAGCTTAGAGCGGATCTTGAGTCCTACCGCCAACGTACGGAGAGGTTGGAGATGGAACTGAAGTCTGAGAAGAAGTGCACAGCAGAGATGGATGATGCACTAAAGAGGGCAGTTATGGGACACGCTAGAATGGTAGAACACTATGCTGATCTACAAGAAAAATATGATGACTTGGTTGCTAAGCATGATGCTATAATGGAAGGGTTAGCAGAGGTGAAGAAGGCAGCGGCAAAAGCCTCGAAAAAAGGTCATGCCCGCTTCGCCAAATCTCTTTCTGCTGAGCTTTCGGCATTGAGGGTGGAAAGAGAAAGGGAATCAAAATTATTGAGAAAGGAGAACCAGAACTTGAAGATTCAACTTCGAGATACTGCTGAAGCTGTCCAGGCTGCTGGAGAACTACTTGTTAGACTAAGAGAAGCTGAACATGCAGCAGCTGTTGCAGAGGAGAACTTTGCAAATGTGCAAcaagataatgaaaatttaaagatgCAAATTGAGAAGcagaaaagaaaacacaagacAGAGATTAATACCATGAAGCAGTACATTACAGAGAGCAAATTACCGGAGTCTGCTCTGCAACCGCTGTATAGAGAGGATTCTGATGTGGCAAAGAATGCAACTTCCTCCTATACGTATGATGATCAGGCATGGAGAGCAGAGTTTGGAGCAATATATCAAGAGCATTATTAA 3480 0.4011 MRQKTNNADSSGFLGSISSNFLRSISSSNRKPTSCSSNPKPPKPDAENTPPTHPNIPLNHHRQSKPNAPFSHTDSHVKVVVRIRPENSSGKEGDWKIKKVSSDGLCVGDRTFTFDEVFDANSNQEDVFQSVGVPLVRNALAGYNTTILSYGQSGSGKTYTMWGTPSAMVEEPLPSSHQGIVPRIIKMLFSELERERLTSDQKQFNYQCRCSFLEIYNEQIGNLVNPIQQNLEMKNDSRNAPYIENLIEEYITNYDEVAQILIKGLSRRKNGATSLNSNSSRSHIIFTFVIESLCKGTAKGFSSSKTSKISLIDLAGLDRDEVDDGGSQCPRESKHVEKSLSQLEHLVDAVANKSRSGKDEDIPHSDSCLTRLLRESLGGSAKLSVICSISPDSRSNDETLRTLRFGEQVTSIRNEPVINLIKVADVDLSNKIRHLKEELIRAKADVHSSAGSKDGYFQGHIVRESLNQMRVSLNRSLLLSNMDSDTDEHVDVNEDDIRQLRQQLDDLDSSCEGNPKDISVNEDCVQFYSVEEKCDAGTTSGDEIEKAEVCCGKTLSNHSRATKSTFSDSISVNSCNQSPILAGPQLSESPKFSKTQRKSVAISSSHLGSWNNVAESSTFINNVLSKPFKQGEHVQSSLQSSKAESLAASLQKGLQTIDYHQQNSALNKSSTSFSFEHLTLTPCLEIDKVESCDQTIQQKPSSDEVTAAFLCASCQTKISNQDSTEIQDSLKSWFEKFGKAGNRDAVTDKIPKHVENVIAKSIMKERELENVCKEQAATIEQLNQLVEKLKGEKELNSVTVYGQCEEYNSMKDEEKLLRGISSNGHLPCIIEEKCEIKEVQEELAQRDVSFDSNEKESLLKEIQNLRSKLQLHSDTPVKRSTDKLRSSLVSRSIQLQKSGVFSYDNGNEELENERQRWTEMESEWICLTDELRADLESYRQRTERLEMELKSEKKCTAEMDDALKRAVMGHARMVEHYADLQEKYDDLVAKHDAIMEGLAEVKKAAAKASKKGHARFAKSLSAELSALRVERERESKLLRKENQNLKIQLRDTAEAVQAAGELLVRLREAEHAAAVAEENFANVQQDNENLKMQIEKQKRKHKTEINTMKQYITESKLPESALQPLYREDSDVAKNATSSYTYDDQAWRAEFGAIYQEHY 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1032 1159 Gene3D Kinesin motor domain 72 453 IPR036961 -
Ssu9g1032 1159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 443 IPR027417 -
Ssu9g1032 1159 MobiDBLite consensus disorder prediction 37 51 - -
Ssu9g1032 1159 Coils Coil 1059 1107 - -
Ssu9g1032 1159 PRINTS Kinesin heavy chain signature 142 163 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu9g1032 1159 PRINTS Kinesin heavy chain signature 273 290 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu9g1032 1159 PRINTS Kinesin heavy chain signature 308 326 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu9g1032 1159 PRINTS Kinesin heavy chain signature 362 383 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu9g1032 1159 Coils Coil 903 923 - -
Ssu9g1032 1159 MobiDBLite consensus disorder prediction 52 71 - -
Ssu9g1032 1159 Pfam Kinesin motor domain 108 412 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu9g1032 1159 Coils Coil 1024 1055 - -
Ssu9g1032 1159 Coils Coil 490 510 - -
Ssu9g1032 1159 PANTHER KINESIN-RELATED 46 1141 IPR027640 GO:0003777|GO:0007018
Ssu9g1032 1159 Coils Coil 848 875 - -
Ssu9g1032 1159 SMART kinesin_4 74 420 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ssu9g1032 1159 PANTHER KINESIN MOTOR DOMAIN PROTEIN 46 1141 - -
Ssu9g1032 1159 Coils Coil 765 792 - -
Ssu9g1032 1159 MobiDBLite consensus disorder prediction 24 76 - -
Ssu9g1032 1159 Coils Coil 928 955 - -
Ssu9g1032 1159 ProSiteProfiles Kinesin motor domain profile. 76 412 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1032 Ssu-Chr9 41051455 41081184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1032 51 454 Miscellaneous Gene Families AT5G06670 31.818 1.18e-45 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1032 K10400 - gmx:100817066 1885.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1032 9 41051455 41081184 Ssu9g1032 9 41051455 41081184 ECH
Ssu9g1032 9 41051455 41081184 Ssu6g3537 6 78716357 78722377 PCT