Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1009 ATGCAACTTAATATCTTTGTATCTTCTCCACCATTTATACAAGTGACTTACCAAGATATTGGTATAACTATTTTTGTAGATATAACAATTGATGTTCTGGAAGACAGTGAAGTCATACCTGTTGCATGCATCTCAGTGTCACTAATGTCAAATGTCCTCAAAACTGTCATCCTTCCATACCTTAACTTCAAATTAAAGAGAGGACTCCCATTACCAATTATTGATGGTTTTGGCTTTCAAAATGCTAATATCTTGTACACTCAACCATGGATTGCAATGTGTAGTGATGTTTTCTTCTTAGAAGATTACTCTAGGTCAACATTTAGCTTatgtttcataaaataa 345 0.3246 MQLNIFVSSPPFIQVTYQDIGITIFVDITIDVLEDSEVIPVACISVSLMSNVLKTVILPYLNFKLKRGLPLPIIDGFGFQNANILYTQPWIAMCSDVFFLEDYSRSTFSLCFIK 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1009 114 PANTHER OS06G0309200 PROTEIN 1 47 IPR045897 -
Ssu9g1009 114 PANTHER OS06G0309200 PROTEIN 47 104 IPR045897 -
Ssu9g1009 114 Gene3D - 45 104 - -
Ssu9g1009 114 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 1 98 IPR017943 GO:0008289
Ssu9g1009 114 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 1 47 - -
Ssu9g1009 114 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 47 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1009 Ssu-Chr9 40650590 40651987 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1009 K05399 - gmx:100815362 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1009 9 40650590 40651987 Ssu6g3522 6 78381767 78385707 PCT