Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1008 ATGGGAGACAATGTTGTAGTGTCCAATATGGAGCTAGAGAGGTTGCTTAGCATGAAAGGAGGCAAAGGAGAGGGCAGCTATGCCAACAATTCCCAAGCACAGGCCATACATGCCAAGTCCATGCATCACCTTCTCAAAGAAGCCCTAGATGGAGTTCAACTTCAAGCCCCTAACATCCCATTTGTGGTTGTGGACTTGGGGTGTTCATGTGGCAGCAACACCATCAATGTGGTGGATGTGATCATCAAGCACATCATCAAACGCTATGAGGCGTTGGGATTAGACCCACCTGAGTTCTCAGCTTTCTTCTCGGACCTTCCTAGCAATGACTTCAACACCCTCTTCCAGCTCCTTCCTCCCTTGGCCAACTATGGAGTTAGCATGGAAGAGTGCCTTGCCGCCAACAACCACCGCGCCTACTTCGCCGCCGGAGTCCCCGGCTCTTTCTACCGGAGACTTTTTCCGGCGAGGTTCATTGACGTTTTCCACTCAGCCTTTTCCTTGCATTGGCTATCTCAGGTGCCAGAATCTGTTATGGACAAGAGGTCAAGTGCATACAACAAGGGCAGGGTGTTTATCCATGGTGCTAGTGAGATCACAGCAAATGCTTACAAAAAACAATTCCAAACAGACTTGGCAAGCTTCTGA 648 0.4954 MGDNVVVSNMELERLLSMKGGKGEGSYANNSQAQAIHAKSMHHLLKEALDGVQLQAPNIPFVVVDLGCSCGSNTINVVDVIIKHIIKRYEALGLDPPEFSAFFSDLPSNDFNTLFQLLPPLANYGVSMEECLAANNHRAYFAAGVPGSFYRRLFPARFIDVFHSAFSLHWLSQVPESVMDKRSSAYNKGRVFIHGASEITANAYKKQFQTDLASF 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1008 215 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 8 215 - -
Ssu9g1008 215 Gene3D Vaccinia Virus protein VP39 30 215 IPR029063 -
Ssu9g1008 215 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 215 IPR005299 GO:0008168
Ssu9g1008 215 Pfam SAM dependent carboxyl methyltransferase 59 215 IPR005299 GO:0008168
Ssu9g1008 215 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 215 IPR029063 -
Ssu9g1008 215 Gene3D - 16 203 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1008 Ssu-Chr9 40614091 40616455 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1008 K18848 - gmx:100801476 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1008 9 40614091 40616455 Ssu6g3520 6 78349170 78353044 PCT