Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1006 ATGGCAGTTACAGATGCTCAAACTCCTCTTCTTGATGAAAACACCTGTGGTTCCTTGTTAAATAAGCTGCAGGAAATATGGGATGAGGTTGGTGAGAATGATGAAGAGCGAGACAAGATGCTCCTTCAGATAGAGCAAGAGTGCTTGGATGTGTACAAAAGAAAGGTCGAGCAGGCTGCTAAGTCAAGGGCACAGCTACTTCAATCCTTGTCTGATGCTAAGCTTGAGCTTTCTAGTCTGTTATCGGCTCTTGGTGAAAACAGCTTCACGGGAATGCCCGACAAGACTTCAGGAACTATTAAGGAACAGCTTTCAGCCATAGCACCAATACTGGAACAATTATGGCaacaaaaagaggaaagaataaAGGAGTTTTCAGATGTACAGCtacaaatccaaaaaatatgtGGAGAGATAACTGGGGACTTGAACCCCGATCAGACAGGATCATTTGCAGTTGATGAGTCTGACCTGTCCTTGAAGAAATTGGATGAATATCAATCCCAACTCCAAGAACTTCAAAGGGAAAAGAGTGAGAGGTTACACAAGGTTCTTGAATATGTGAGTACTGTGCATGATCTTTGTGCTGTCATTGGCATGGACTTCTTCAGTATTGTGACTGAGGTTCATCCAAGCTTAAATGATTCTATTGGTGTTCATTCCAAAAGTATAAGCAATGGCACACTAGCTAAACTGGCTAAGACAGTCTCAACACTGAAAGAAGATAAAACACAGAGGTTGCACAAGCTCCAAGAATTAGCTTCTCAGTTAATTGATCTGTGGAATCTAATGGATAGCCCTATAGAGGAAAGGAGACTATTTGACCATGTTACCTGTAATAAGTCAACTTCTGTAGATGAAGTCACTGTTCCCAGTGCCCTTGCTCTGGATCTGATTGAGCAGGCTGAAGTGGAAGTTGAAAGGCTTGATCAGCAGAAAGCCAGCAGGATGAAAGAAATTACTTTCAAGAAGCAAGATGAGCTTGAAGAGATATATGTCCATGCTCATATAGAAATAAACCCCGAAGCTGCTCGAGGGAAGATTTTGTCACTGATCGACTCTGGAAACACTGAACCAGCCGAATTACTGGCTGACATGGACAAACAGATAGCTACAGCGAAAGAAGAAGCTGTAAGCCGAAAAGAAATATTGGACAAGGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGGCTTGAAGACTATAATCGGGATGAAAACAGGTATAATGCAAGTAGAGGTGCACACTTAAACCTCAAACGTGCAGAGAAAGCTCGGATATTGGTCAACAAAATTCCAGCTTTGGTTGATACATTGGTTGCTAAAACTCGTGCTTGGGAAGAAGTACACAACATGTTCACATATGATGGTGTTCCTCTTCTTGCTATGTTGGATGAATATGCCATGCTCAGGCATGAACGGGGAGAGGAAAAACGAAGGATGAGGGACCAGAAAAAGTATCATGAGCAGCAAAACACAGAACAGGAATCTGTGTTTGGTTCAAGACCCAGCCCTGCAAGGCCACTTGGCAACAAGAAGGTAGTTGGCCCTCGTCCCAACGGAGGAGCGAACTGTACTCCTAACCGACGGCTATCTCTTAATGCTCATCAAAATGGAAGCAGGTCCTCAACAAAAGATGGAAAAAGGGATAGTCCTAGACCAGTTGCTCCCCTTAACTATGTATCAATATCAAAAGAAGATGCTGCTTCCCATGTTTCTGGCACTGAACCAGTCCCAACATCACCCTAG 1752 0.4252 MAVTDAQTPLLDENTCGSLLNKLQEIWDEVGENDEERDKMLLQIEQECLDVYKRKVEQAAKSRAQLLQSLSDAKLELSSLLSALGENSFTGMPDKTSGTIKEQLSAIAPILEQLWQQKEERIKEFSDVQLQIQKICGEITGDLNPDQTGSFAVDESDLSLKKLDEYQSQLQELQREKSERLHKVLEYVSTVHDLCAVIGMDFFSIVTEVHPSLNDSIGVHSKSISNGTLAKLAKTVSTLKEDKTQRLHKLQELASQLIDLWNLMDSPIEERRLFDHVTCNKSTSVDEVTVPSALALDLIEQAEVEVERLDQQKASRMKEITFKKQDELEEIYVHAHIEINPEAARGKILSLIDSGNTEPAELLADMDKQIATAKEEAVSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVDTLVAKTRAWEEVHNMFTYDGVPLLAMLDEYAMLRHERGEEKRRMRDQKKYHEQQNTEQESVFGSRPSPARPLGNKKVVGPRPNGGANCTPNRRLSLNAHQNGSRSSTKDGKRDSPRPVAPLNYVSISKEDAASHVSGTEPVPTSP 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1006 583 MobiDBLite consensus disorder prediction 476 583 - -
Ssu9g1006 583 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 5 583 IPR007145 GO:0000226|GO:0008017
Ssu9g1006 583 MobiDBLite consensus disorder prediction 476 493 - -
Ssu9g1006 583 Coils Coil 292 319 - -
Ssu9g1006 583 MobiDBLite consensus disorder prediction 567 583 - -
Ssu9g1006 583 MobiDBLite consensus disorder prediction 526 542 - -
Ssu9g1006 583 Gene3D - 370 502 - -
Ssu9g1006 583 Coils Coil 156 183 - -
Ssu9g1006 583 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 506 - -
Ssu9g1006 583 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 1 5 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1006 Ssu-Chr9 40599814 40603817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1006 13 508 EF-hand Containing Proteins AT5G62250 43.281 1.69e-116 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1006 K16732 - qsu:112012954 953.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1006 9 40599814 40603817 Ssu9g1006 9 40599814 40603817 ECH
Ssu9g1006 9 40599814 40603817 Ssu6g3518 6 78324644 78327762 PCT