Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0955 ATGTGCAACAGAATTGTGATGGGaaattctcttctctttatctctttcttcatCTTCAGTTTAGGACTCTTGGAGGCTCAAAAGGCTCCAGCTGTTTATGTGTTTGGAGACTCACTTGTTGATGTTGGCAACAATAATTACTTGAGTCTCTCCATTGAAAAGGCAATTCTTCCTCGCTATGGCATTGATTTTCCAACTAAGAAACCCACTGGGAGATTTAGCAATGGCAAGAATGCTGCAGATTTAATTGCTGAAAAATTGGGCCTACCCACTTCACCACCTTATCTCTCCCTAGTATCTAAGGTCCACAACAACAAGAACGTATCTTTCTTAGGTGGTGTTAACTTTGCCTCCGGAGGTGCTGGAATATTTAATGGCTCAGATGAAAGTTTTGGGCAATCAATACCTTTGACAAAGCAAGTGGACTACTACTCACAAGTGCATGGACAACTGATACAACAAATAGGAGCATCTACTCTTGAGAAACATCTCTCAAAGTCCATCTTTATTGTGGTGATTGGAGGCAACGATATCTTTGGTTACTTTGACTCAAAGGATCTTCAAAAGAAAAGCACCCCACAACAGTATGTGGATTCCATGGCTTCCACATTAAAAGTGCAACTACAGAGATTATACAACAATGGTGCAAAGAAATTTGAGATTGCTGGTCTTGGTGCAATTGGGTGCTGCCCTGCATACAGGCTCAAGAACAAAACAGACTGCGTTTCTGAAGCCAATTACTTGTCGGTTAAGTATAATGAAGCTCTTCAATCCATGTTAAAGGAATGGCAATTGGAGAACAAGGACATAAGTTACTCCTACTTTGATACTTATGCGTCCATCCAAGACCTCATTCACAATCCAACTTCTTATGGATTTGCTAATGTGAAAGCCGCTTGTTGTGGACTTGGTGAGCTGAATGCCCAATTTCCATGCCTGCCAATTTCGAGCGTTTGTTCCAATAGACAAGACCATATTTTCTGGATCCATTCCATCCTACGGAGGCAGCTGCTCGCATCTTCGTGgatgaaatttttaatggaccttCAAAATACGCATCTCCTATTAATATGGAACAGCTACTGGCCATCTGAATTGGCAAATCAGTTAGTcctttgtaataatttatttatttttgtttgtgggGTTACTCGTTATCAAACAACAATAGAATAa 1176 0.3835 MCNRIVMGNSLLFISFFIFSLGLLEAQKAPAVYVFGDSLVDVGNNNYLSLSIEKAILPRYGIDFPTKKPTGRFSNGKNAADLIAEKLGLPTSPPYLSLVSKVHNNKNVSFLGGVNFASGGAGIFNGSDESFGQSIPLTKQVDYYSQVHGQLIQQIGASTLEKHLSKSIFIVVIGGNDIFGYFDSKDLQKKSTPQQYVDSMASTLKVQLQRLYNNGAKKFEIAGLGAIGCCPAYRLKNKTDCVSEANYLSVKYNEALQSMLKEWQLENKDISYSYFDTYASIQDLIHNPTSYGFANVKAACCGLGELNAQFPCLPISSVCSNRQDHIFWIHSILRRQLLASSWMKFLMDLQNTHLLLIWNSYWPSELANQLVLCNNLFIFVCGVTRYQTTIE 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0955 391 Gene3D SGNH hydrolase 22 374 IPR036514 -
Ssu9g0955 391 CDD SGNH_plant_lipase_like 30 330 IPR035669 -
Ssu9g0955 391 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 6 328 - -
Ssu9g0955 391 SUPERFAMILY SGNH hydrolase 29 284 - -
Ssu9g0955 391 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 328 - -
Ssu9g0955 391 Pfam GDSL-like Lipase/Acylhydrolase 32 328 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0955 Ssu-Chr9 39403501 39406704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0955 29 328 Acyl Lipid Metabolism Gene Families AT4G10950 34.754 6.81e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0955 - - gmx:100790145 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0955 9 39403501 39406704 Ssu9g0955 9 39403501 39406704 ECH
Ssu9g0955 9 39403501 39406704 Ssu6g3480 6 77677770 77682587 PCT