Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3480 ATGGGTAAAAGAGCTTTCCTGGGGTGTTCGTTGCTCTCTATTATCTATGCCTTCATCTTCAGCTTTGGTTCCTCAAAGGCTCAAATGGTTCCGGCTGTTTATGTGTTTGGAGACTCCCTTGTAGACGTGGGCAACAACAATTACTTAACTCTTTCCATTGCAAAGGCAAATCATCGTCACTATGGCATTGATTTTCCTACCCACAAACCAACTGGGAGATTTAGCAACGGCAAGAATGCTGCAGACTTTGTTGCTGAGAAATTGGGTTTGCCAACTTCGCCACCTTACCTCTCCCTAGTATCAAAGGCCAACAAAAACAATGTATCCTTCATGGATGGTGTCAGCTTTGCCTCTGCAGGTGCTGGGATATTTGATGGCACAGACGAACGTTATAGGCAATCAATACCGTTGACAAAACAAGTGGACTACTACTCAATTGTACATGAGGAAATGACACGAGAGGTAGGAGCAGCTGGTCTACAGAAGCAcctctcaaaatcaattttcgtTGTGGTAATTGGCAGCAATGATATCTTTGGATACTTCGAATCATCGGATCTCCGTAAGAAAAGCACCCCACAGCAGTATGTGGATTCCATGGCTTTCTCACTAAAAGCTCAACTACAGcGATTATACGATCATGGTGCCCGTAAATTTGAGATTGCGGGAGTTGGAGCACTTGGATGCTGCCCTACATTCAGGCTCAAGAACAAAACGGAATGCGTTGTAGAAGCCAATTATTGGTCGGCAAAATATAATGAAGGCCTTCAATCCATGTTGAAGGAATGGCAATCGGAGAAGGGAGGCATAATTTACTCCTACTTTGACACGTATGCTGCCATCAGCGACCTCATTCAGAGTCCAGCTTCCTGTGGATTTACTGAGGTAAAAGCTGCTTGTTGTGGACTGGGCGAGCTGAATGCCAGGGCTCCCTGCCTGCCATTGTCAAACCTTTGTCCTAACAGACAAGATCACATCTTCTTTGACCAATTCCATCCCACGGAGGCAGCTTCTAGTATACTTGTAAATAGAATTTTTGATGGTCCTTCAAGTTACACATCTCCCATTAATATGAGACAGCTGGTAGCTGCCTGA 1095 0.4402 MGKRAFLGCSLLSIIYAFIFSFGSSKAQMVPAVYVFGDSLVDVGNNNYLTLSIAKANHRHYGIDFPTHKPTGRFSNGKNAADFVAEKLGLPTSPPYLSLVSKANKNNVSFMDGVSFASAGAGIFDGTDERYRQSIPLTKQVDYYSIVHEEMTREVGAAGLQKHLSKSIFVVVIGSNDIFGYFESSDLRKKSTPQQYVDSMAFSLKAQLQRLYDHGARKFEIAGVGALGCCPTFRLKNKTECVVEANYWSAKYNEGLQSMLKEWQSEKGGIIYSYFDTYAAISDLIQSPASCGFTEVKAACCGLGELNARAPCLPLSNLCPNRQDHIFFDQFHPTEAASSILVNRIFDGPSSYTSPINMRQLVAA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3480 364 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 7 362 - -
Ssu6g3480 364 SUPERFAMILY SGNH hydrolase 32 347 - -
Ssu6g3480 364 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 7 362 - -
Ssu6g3480 364 Pfam GDSL-like Lipase/Acylhydrolase 33 344 IPR001087 GO:0016788
Ssu6g3480 364 CDD SGNH_plant_lipase_like 31 349 IPR035669 -
Ssu6g3480 364 Gene3D SGNH hydrolase 22 350 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3480 Ssu-Chr6 77677770 77682587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3480 30 348 Acyl Lipid Metabolism Gene Families AT4G10950 32.407 1.10e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3480 - - gmx:100777307 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3480 6 77677770 77682587 Ssu6g3480 6 77677770 77682587 ECH
Ssu9g0955 9 39403501 39406704 Ssu6g3480 6 77677770 77682587 PCT