Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0613 ATGGCTCAAAATCATGTAATTGTTGCATTGGGTTTGCTGTGTGCTTGGACTTGGATGCAGGGCACACGTGGCGAGTACTTAATTGGAGTTGGGAGCTATGACATGACTGGTCCCGCTGCTGATGTGAACATGATGGGCTATGCCAACTTTGGACAGAACACAGCTGGTATTCATTTCCGGCTAAGAGCCAGAACTTTCATTGTGGCTGAGAGCCTTCAAGGCCCTAGGTTTGTTTTTATCAACCTTGATGCTGGAATGGCATCTCAACTTCTAACTCTCAAGGTGCTCGAGAGACTTAATTCAAGGTTTGGAAATTTGTATACTAAAGAAAATGTAGCAATCAGTGGGACTCATACACATGCTGGCCCTGGCGGTTACCTCCAATATGTGGTTTACTCTGTGACTTCTCTGGGTTTTGTGAAACAATCCTTTGATGCCATTGCGAATGCTATAGAACAAAGCATTATTCAAGCTCACAACAACCTTAAGCCAGGTTCCATTTTTATGAATATAGGAGATGTGAAGGATGCAGGTATAAACAGGAGTCCAAGTGCATATTTGCAAAACCCTGCAGAGGAGAGAGCAAGATATCCCACCATTGTTGACACACAAATGACCCTTCTGAGGTTTGTGGATGGAGCAAGTGGTAAAAATATTGGAGCATTCAACTGGTTTGCAACACATGGAACCTCCATGAGCAAAGAAAACAAGCTTATTAGCGGAGATAACAAGGGTGTTGCTGCAAGACTTTTTGAAGATTGGTATGCTTCTCAAAATAAATCTTCATCTTCAAACACCAATTCCACAGTACCAggtatcttaaaattttATATTGGCCAACTAGTGAAGAGGGCACGATCAATTAAGGCCACAGGAGGAAAGGATTGCAACCAACAAGCAAGCCAAGCGTCCAAGGTGAGAAAGAATGATGGATCCTTATTTGTTGGAGCATTTTGCCAATCAAATGTTGGAGATGTGTCACCAAATGTTCTAGGAGCATTTTGCATCGACAGTGGAAAACCTTGTGACTTCAACCATTCTTCATGCAATGGCAATGACCAACTTTGTGTAGGCAGGGGACCCGGGTACCCAGATGAAATATTAAGTACAAAGATCATAGGTGAAAGGCAATTCAAAACTGCTGTGGCACTGTTTGAGTCTGCTTCAGAGGAACTGACAGGGAAGATTGACTATCGCCATGTGTACCTGAACTTCACAGACATCGAAGTTGAATTGGACAGCAACAAGGTGGTTAAAACTTGCCCTGCAGCACTTGGTCCTGGTTTTGCAGCAGGCACGACAGATGGGCCAGGTGTTTTTGGGTTTCAACAAGGTGATACAAAGATTAATCGGTTTTGGAAGAATGTGAGGGATTTTCTGAAAGAACCAAGTCAACATCAAGTGGACTGCCAAAACCCAAAGCCAGTTTTGTTGAGCACTGGCGAAATGTTTGATCCTTATCCTTGGGCGCCAGCAATTCTTCCAATTCAAATCCTAAGATTGGGAAAGTTGATCATTCTTTCTGTACCAGGAGAGTTTACAACAATGGCTGGCAGAAGGCTAAGGGAGGCAGCGAAGGAGACATTAATATCTAGCAGCAACGGAGAATTCAATGATGAAACACGCGTGGTTATAGCAGGACTGACAAATACTTACTCACAATATATTGCTACTTTTGAAGAATACCGGCACCAACGGTATGAGGCTGCTTCAACACTGTATGGTCCTCACACATTATCAGCATACATCCAAGAATTTAAGAAACTAGCACAAGCAATGGCCAAAGGAGAGAACATCACTGTAAAAGGTCCTTCACCACCAGATCTTTCATCTGTACAGATAAGCCTCTTACTTGGTCCCTTTGGAAACTCACCTCCAGAAGGAACCAAATTTGGTGACATAGAGGAAGACATAGCCTTTCCAAAAAGAGGATATTTTACGAAGGGAGATACACCAAGTGCCACATTCTGGAGTGCCAATCCAAGATATGACCTTCTAACAGAAGGCACATTTGCTGCAGTGGAGAGGCTTCAAGGGGAAAGATGGATTGCTgtgtatgatgatgatgatttaaGCTTGTTTTTCAAGTGGAAAGTGGATAATAGTTCCTTGCATGGCTTAGCTACCATAGAATGGGAAATACCAAATGATGCTGTTTCTGGAGTATACAGACTAAAACACTTTGGAGCAACAAAGATCACCATTGCCTCccctattaattattttactggTGCTTCACGTGCATTTGCAGTGCAATAG 2259 0.4214 MAQNHVIVALGLLCAWTWMQGTRGEYLIGVGSYDMTGPAADVNMMGYANFGQNTAGIHFRLRARTFIVAESLQGPRFVFINLDAGMASQLLTLKVLERLNSRFGNLYTKENVAISGTHTHAGPGGYLQYVVYSVTSLGFVKQSFDAIANAIEQSIIQAHNNLKPGSIFMNIGDVKDAGINRSPSAYLQNPAEERARYPTIVDTQMTLLRFVDGASGKNIGAFNWFATHGTSMSKENKLISGDNKGVAARLFEDWYASQNKSSSSNTNSTVPGILKFYIGQLVKRARSIKATGGKDCNQQASQASKVRKNDGSLFVGAFCQSNVGDVSPNVLGAFCIDSGKPCDFNHSSCNGNDQLCVGRGPGYPDEILSTKIIGERQFKTAVALFESASEELTGKIDYRHVYLNFTDIEVELDSNKVVKTCPAALGPGFAAGTTDGPGVFGFQQGDTKINRFWKNVRDFLKEPSQHQVDCQNPKPVLLSTGEMFDPYPWAPAILPIQILRLGKLIILSVPGEFTTMAGRRLREAAKETLISSSNGEFNDETRVVIAGLTNTYSQYIATFEEYRHQRYEAASTLYGPHTLSAYIQEFKKLAQAMAKGENITVKGPSPPDLSSVQISLLLGPFGNSPPEGTKFGDIEEDIAFPKRGYFTKGDTPSATFWSANPRYDLLTEGTFAAVERLQGERWIAVYDDDDLSLFFKWKVDNSSLHGLATIEWEIPNDAVSGVYRLKHFGATKITIASPINYFTGASRAFAVQ 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0613 752 Pfam Neutral/alkaline non-lysosomal ceramidase, C-terminal 586 751 IPR031331 -
Ssu9g0613 752 PANTHER NEUTRAL CERAMIDASE 13 752 - -
Ssu9g0613 752 PANTHER CERAMIDASE 13 752 IPR006823 GO:0017040|GO:0046514
Ssu9g0613 752 Pfam Neutral/alkaline non-lysosomal ceramidase, N-terminal 26 584 IPR031329 -
Ssu9g0613 752 Gene3D - 621 752 IPR038445 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0613 Ssu-Chr9 28453749 28461855 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0613 K12349 - gmx:100793262 1362.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3562 6 79238689 79239462 Ssu9g0613 9 28453749 28461855 PCT