Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3562 ATGGAtcaacttaaaaaacaaaatatagcaACCTTGACTCAGAACATAAAAGCCCATTACTATCTAGTTAAGCTTACCCAATTATTCGTTTCAGTATCCTTGTGCTCCTTCATCTTCTCACCTTCTTCCTTTCTTGTTTTCCTCCATTACTTCAAATTCTATTTCTCTACATTCCCCTTCCAACTCTATACCCACAACATAGACAAGAACTGCATGTTCCTCCTTTGCAATGGTCTCCTTGTTTTTGTTGGTATAACTAAATCTCTCTCCGGCTCTAGTTCTGATGATAAGCCttctaagtatattaaaaatggtTCACAATCTCAGTTCTCAGTTATTGAAGCCACCGAGCTAATATTGGAGGTAGTAGAAACTGAGGAACAAACTAGTAAGCCTGATGAACAGAACATTGCAGCAGAGCaagtaatagaaataaaaaactgtGCTGAAGAAGAAGTGCAAGAAAACGTTGAGAAGATAATTTTGGTAGACGAAGGACAAGGAAAAGGAAGTAGCCAGTTAGCAATGAAAGAAGAAGACAAGGAGGTAGAAGAAGAAACTGAACTATTTGATGAAAGTGATGAAGAGGAAGACAAAGGGTCAGAAATTGATTACTTTCTGGTTGAAGAGAACatagaagaggaagaagaaaatgtaGAAGAAGAAAGCTGTATGTTGAGCACAGAGGAGTTGAACAAAAGAGTTGAAGATTTCATTAGAAAGATGAAGGAAGATCTAAGAATTGAAGCTCAACGCCAATTAGTCATGGTTTGA 774 0.3424 MDQLKKQNIATLTQNIKAHYYLVKLTQLFVSVSLCSFIFSPSSFLVFLHYFKFYFSTFPFQLYTHNIDKNCMFLLCNGLLVFVGITKSLSGSSSDDKPSKYIKNGSQSQFSVIEATELILEVVETEEQTSKPDEQNIAAEQVIEIKNCAEEEVQENVEKIILVDEGQGKGSSQLAMKEEDKEVEEETELFDESDEEEDKGSEIDYFLVEENIEEEEENVEEESCMLSTEELNKRVEDFIRKMKEDLRIEAQRQLVMV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3562 257 PANTHER PROTEIN, PUTATIVE-RELATED 3 257 - -
Ssu6g3562 257 MobiDBLite consensus disorder prediction 171 201 - -
Ssu6g3562 257 Coils Coil 212 232 - -
Ssu6g3562 257 Coils Coil 176 196 - -
Ssu6g3562 257 MobiDBLite consensus disorder prediction 181 201 - -
Ssu6g3562 257 PANTHER TRANSMEMBRANE PROTEIN 3 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3562 Ssu-Chr6 79238689 79239462 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3562 - - gmx:100776851 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3562 6 79238689 79239462 Ssu6g3562 6 79238689 79239462 ECH
Ssu9g1073 9 42101774 42102532 Ssu6g3562 6 79238689 79239462 PCT
Ssu6g3562 6 79238689 79239462 Ssu9g0613 9 28453749 28461855 PCT