Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0446 ATGGCTCTCATGGGCTTGTCGGGTTTTGTTGCTTTGACCCTTTGTTTCTTGGTGTTAGCATCTGTGCCCCGTCAGGCACAGGCATCAAGCCGTGGCTTTTATGGTATAAAAGACGTTGCAGCTGAACCTCCAGTTGATGGCTTATGCGCCTCTTCAGTCACCATTCATGGCTACAAATGTCAGGAACTTGAAGTTACAACTAAAGATGGGTACATTATTAGCCTTCAAAGGATCCCTCAAGGTCGAGCTGAAATTAGTGGCCGTCGGACTGAGAAACAGCCGGTGATACTACAGCACGGAGTACTGGTGGATGGAATGACATGGCTTCTGAACCCTCCGGAGCAAAACCTGCCCTTGATTCTAGCTGATTATGGCTTTGATGTGTGGATTGCTAACGCCAGAGGAACAAGATATAGCCGCAGACACACCTCTCTGGACCCCTCTAGCCCAGCCTATTGGAATTGGTCTTGGGATGAAATGGTGACTTATGATCTGCCTTCTATTTTTGATTATGTGTCCAACCACACAGGACAGAAGATAAATTACGTGGGCCATTCTTTGGGAACATTGGTAGCTTTGGCATCATTCTCAGAAGGGAAATTGGTGAATCAGCTAAAATCAGCAGCCTTGTTAAGTCCGGTTGCCTATTTGAGCCACATGAAGACGGCAGTTGGAGTTGTTGCAGCCAACTCCTTTGTTGGAGAGATCATTACACTTATTGGTATGGCAGAATTTGATCCCAAAGGGTTACCTGTTGTTAACTTTATCCAGTCACTCTGTCTTCACTCTGGGGTAGACTGCACAGACTTGTTAACTGCAATAACTGGTGATAATTGCTGCCtcaattcttcaactgttaatCTATTCATGATGAATGAACCTCAGCCAACATCAACAAAGAACATGGTGCACTTGTCTCAGACTGTTAGACTCGGGGTTCTGACAAAATTCAATTATGAGAGGCcagaatataatattatgaattatggaGAAGTATTCCCTCCAATCTATAACCTTTCCAATATCCCCCATAACCTCCCTCTCTTCATAAGCTATGGGGGTAAAGATGCACTCTCTGATGTTATTGATGTCAGGAATATGCTTGATCACTTCAAGTTCCATGATGTAGACAAGCTAAGTGTTCAGTTCATCGAGGACTATGCTCATGCTGACTTCGTTATGGGGGTCAATGCCAAGGACGTAGTGTACAATGCTGTTACTGcatttttcaaatcaatttaa 1242 0.4283 MALMGLSGFVALTLCFLVLASVPRQAQASSRGFYGIKDVAAEPPVDGLCASSVTIHGYKCQELEVTTKDGYIISLQRIPQGRAEISGRRTEKQPVILQHGVLVDGMTWLLNPPEQNLPLILADYGFDVWIANARGTRYSRRHTSLDPSSPAYWNWSWDEMVTYDLPSIFDYVSNHTGQKINYVGHSLGTLVALASFSEGKLVNQLKSAALLSPVAYLSHMKTAVGVVAANSFVGEIITLIGMAEFDPKGLPVVNFIQSLCLHSGVDCTDLLTAITGDNCCLNSSTVNLFMMNEPQPTSTKNMVHLSQTVRLGVLTKFNYERPEYNIMNYGEVFPPIYNLSNIPHNLPLFISYGGKDALSDVIDVRNMLDHFKFHDVDKLSVQFIEDYAHADFVMGVNAKDVVYNAVTAFFKSI 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0446 413 Gene3D alpha/beta hydrolase 39 412 IPR029058 -
Ssu9g0446 413 PANTHER TRIACYLGLYCEROL LIPASE 2 13 411 - -
Ssu9g0446 413 Pfam alpha/beta hydrolase fold 117 229 IPR000073 -
Ssu9g0446 413 PANTHER LYSOSOMAL ACID LIPASE-RELATED 13 411 - -
Ssu9g0446 413 PIRSF Steryl_ester_lip 6 413 IPR025483 GO:0016788
Ssu9g0446 413 Pfam Partial alpha/beta-hydrolase lipase region 53 111 IPR006693 GO:0006629
Ssu9g0446 413 SUPERFAMILY alpha/beta-Hydrolases 54 411 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0446 Ssu-Chr9 22532370 22540079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0446 44 412 Acyl Lipid Metabolism Gene Families AT2G15230 37.940 6.22e-96 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0446 K01052 - gmx:100779460 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1949 4 37018269 37025077 Ssu9g0446 9 22532370 22540079 PCT