Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0445 ATGGGGCTCAAGAACACAATTTTCTTGGCACTGGTAGCTACCTTGATTGCAAAGGAGGCCTTGGCAGCACAGCATGTAGTTGGTGGAAACCAAGGCTGGGATCAATCCACAGACTTTAAGTCATGGACTTCAGGCCAAACATTCAAGGTTGGAGATAAACTTGTTTTCAAGTACAGTTCTTTGCATAGTGTGGTTGAACTAGGAAGCGAGAGTGCCTACAAGAATTGTGATATTAGCAGTCCAGTCCAGTCCTTGAGCACTGGCAACGATGTTGTGAAACTGGACAAGCCAGGTACAAGGTACTTCACTTGTGGTACCTTGGGCCACTGTAGTCAAGGGATGAAGGTGAAGATTTCCACAGTGAAAGGGAATGCTCTTTCCCCTGCATCGTCACCATCACTATCACCATCATtgtcaccatcatcatcatcaccttCATTATCACCTGccgtcttcttcttcttcttcttctcctacaACTACTGA 486 0.4095 MGLKNTIFLALVATLIAKEALAAQHVVGGNQGWDQSTDFKSWTSGQTFKVGDKLVFKYSSLHSVVELGSESAYKNCDISSPVQSLSTGNDVVKLDKPGTRYFTCGTLGHCSQGMKVKISTVKGNALSPASSPSLSPSLSPSSSSPSLSPAVFFFFFFSYNY 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0445 161 Gene3D - 21 125 IPR008972 -
Ssu9g0445 161 PANTHER BNAA06G32330D PROTEIN 7 134 - -
Ssu9g0445 161 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Ssu9g0445 161 CDD Phytocyanin 23 119 - -
Ssu9g0445 161 PANTHER BLUE COPPER PROTEIN 7 134 IPR039391 GO:0009055
Ssu9g0445 161 SUPERFAMILY Cupredoxins 22 119 IPR008972 -
Ssu9g0445 161 ProSiteProfiles Phytocyanin domain profile. 23 122 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0445 Ssu-Chr9 22523617 22524451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g0445 7 121 Miscellaneous Gene Families AT3G27200 66.087 3.24e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0445 - - gmx:100306337 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0445 9 22523617 22524451 Ssu4g1950 4 37028104 37028888 PCT