Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0303 ATGTTGAGGGTTGCCGCTAGGAAgctttcttctctctcctcgTCTCCGTGGCGGGCCAACCGCGCCGCTTCCGCCTACCTCTCTCGAAACGTCGTCGTTGACGACCGCAGATCCGCGCCTTCCTCTGACCCCAGCACTTTCCTTCTTCCCTTTAGAGGTTTTGCTACTGAATCACTGAtccacacaaaagaaaacagcATTATTCCTGAGATTCCGGCAACTGTTACTGCTGTTAAGAACCCTACTTCTAAGATTGTTTATGATGATCACAACCATGAACGATTTCCCCCGGGTGACCCAAGCAAGAGGGCATTTGCTTACTTTGTCCTTACAGGCGGTAGGTTTGCTTATGCCTCTCTAGTCCGTCTCCTTATCCTCAAGTTTGTGCTTAGCATGTCTGCCAGTAAGGATGTTCTTGCTCTGGCTTCAATTGAGGTTGATCTCTCCAGCATTGAGCCCGGCACTACGGTGACCGTTAAGTGGCGTGGAAAGCCTGTGTTCATCAGGCGCCGAACCGAGGATGATATCAAACTGGCCAACAGTGTTGATGTTGGATCTCTTCGCGATCCCCAGCCAGATACAGATAGAGTGAAGGACCCAGAATGGCTCATTGTAATTGGGGTTTGCACACACTTGGGTTGCATTCCATTGCCAAATGCTGGTGACTTTGGTGGATGGTTTTGCCCATGCCATGGATCACATTATGATATTTCTGGCAGAATTAGGAAGGGACCGGCACCATACAATCTGGAGGTTCCTACCTATACCTTCTTGGATGAAAACAAGTTGTTGATTGGTTGA 801 0.4694 MLRVAARKLSSLSSSPWRANRAASAYLSRNVVVDDRRSAPSSDPSTFLLPFRGFATESLIHTKENSIIPEIPATVTAVKNPTSKIVYDDHNHERFPPGDPSKRAFAYFVLTGGRFAYASLVRLLILKFVLSMSASKDVLALASIEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQPDTDRVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0303 266 Pfam Ubiquinol cytochrome reductase transmembrane region 99 137 IPR004192 GO:0008121
Ssu9g0303 266 SUPERFAMILY ISP domain 128 264 IPR036922 GO:0051537
Ssu9g0303 266 CDD Rieske_cytochrome_bc1 143 266 - -
Ssu9g0303 266 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 266 - -
Ssu9g0303 266 TIGRFAM Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 121 266 IPR006317 GO:0008121
Ssu9g0303 266 Pfam Rieske [2Fe-2S] domain 149 252 IPR017941 GO:0051537
Ssu9g0303 266 PRINTS Rieske 2Fe-2S subunit signature 204 215 IPR005805 GO:0016020|GO:0051537
Ssu9g0303 266 PRINTS Rieske 2Fe-2S subunit signature 238 250 IPR005805 GO:0016020|GO:0051537
Ssu9g0303 266 PRINTS Rieske 2Fe-2S subunit signature 226 238 IPR005805 GO:0016020|GO:0051537
Ssu9g0303 266 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 266 IPR014349 GO:0051537
Ssu9g0303 266 SUPERFAMILY ISP transmembrane anchor 82 139 - -
Ssu9g0303 266 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 176 264 IPR017941 GO:0051537
Ssu9g0303 266 Gene3D - 135 266 IPR036922 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0303 Ssu-Chr9 15231027 15233259 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0303 K00411 - gmx:100806917 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1840 4 33540674 33542963 Ssu9g0303 9 15231027 15233259 PCT