Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0300 atggcacATTCGGGTTCGGAAGGAAAGGGTCACGAGAAGAAGAAGGAGGTGATTCGGATAGAGCGTGAATCGGTCATTCCAGTTTTGAAGCCTCAGCTCATCATGACATTGACCAACCTTATTAAACGTAGTTCTGACCGAGTTGAGTTTTTGAAGCTCTGCAAGAGAATAGAGTACACAATTCGAGCTTGGTACCTTCTACAGTTTGAGGACATGATGCAACTCTATTCTCTCTTTGATCCTGTATCTGGGGCTCAGAAGTTGGCACAGCAGAAGTTACCTCGTGAAGAAATTGATGCACTTGAACAGAATTTCTTGGCTTACCTTTTCgagGTCATGAGAAAAAGCAACTTCAAGATTGCAACTCAAGAAGAGATTGATGTGGCACTTTCTGGACAGTATCTTCTAAATCTTCCCATTACTGTCAATGAATCTAAGCTTGACAAggttcttttgaaaaaatattttgaagcacaTCCTCAAGATGACCTTCCAGATTTCTACGATAAGTATATTATTTTTCGGCGTGGCATTGGAATTGATCGAACCACTGATTACTTTATCATGGAGAAAGTGGACATGCTCATAGCACGTTTTTggtcatatatattaagaataacCAGGTTGGAAAAGTTTTTCTCCAGAAGGTCAGAAAGGCGTCATGGGAAGGATCCCAAGAAGGATGATGAAACTAACTTGGAGTCGGAAGATTATCAGGATGATGTATATGAACGGATACGTCTTGAAAAAATGCCATTGAGTTTCAATAGTTTGCTGAACAAGAACACAATCCAAGAACCTACATTTGATAGGATAATTGTTGTCTACAGGCCAGCTAGTTCCAAATCAAAACCAGATAGAGGAATTTTTGTGAAGCATTTCAAGAACATTCCCATGGCTGATATGGAAATAGTTCTTCCAGAAAAGAAAAATCCTGGATTGACTCCAATGGATTGGGTCAAGTTTCTTGGATCTGCTATAGTTGGGCTGGTTGCTGTAGCTAGTTCTCTTAAAGTGGATACAGCTGATTTGCGGGTCATTGGTGCCGTTCTTTCCACAGTACTTGGATATTTTGTTAAGACATACTTCACGTTCCAACAAAACTTGATCGCATACCAAAATTTGATTACACAGTCAATGTATGACAAACAACTGGACAGTGGAAAGGGTACACTTCTCCATTTATGTGATGATGTCATTCAACAGGAAGTTAAAGAggtaataatatcatttttcattctGATGGAGCAGGGAAAAGCTAATAGACAAGAGCTCGATCAATGGTGTGAGGAGTTAATCAGAGAAGAGTTTGGGAAGAGCTGTAATTTTGAAGTGGATGATGCAATTCAGAAATTAGAGAAGTTGGGAATTGTCACCAAGGATATCATTGGCCGGTATCAATGCGTTGGACTGAAACGGGCTAACGAGATAATAGGTACCACCACTGAAGAGCTTGTCCTTAAGGCAAAACAGGGAAACATTGCTCCTTGA 1491 0.3836 MAHSGSEGKGHEKKKEVIRIERESVIPVLKPQLIMTLTNLIKRSSDRVEFLKLCKRIEYTIRAWYLLQFEDMMQLYSLFDPVSGAQKLAQQKLPREEIDALEQNFLAYLFEVMRKSNFKIATQEEIDVALSGQYLLNLPITVNESKLDKVLLKKYFEAHPQDDLPDFYDKYIIFRRGIGIDRTTDYFIMEKVDMLIARFWSYILRITRLEKFFSRRSERRHGKDPKKDDETNLESEDYQDDVYERIRLEKMPLSFNSLLNKNTIQEPTFDRIIVVYRPASSKSKPDRGIFVKHFKNIPMADMEIVLPEKKNPGLTPMDWVKFLGSAIVGLVAVASSLKVDTADLRVIGAVLSTVLGYFVKTYFTFQQNLIAYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVIISFFILMEQGKANRQELDQWCEELIREEFGKSCNFEVDDAIQKLEKLGIVTKDIIGRYQCVGLKRANEIIGTTTEELVLKAKQGNIAP 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0300 496 Pfam Protein of unknown function (DUF3754) 269 390 IPR022227 -
Ssu9g0300 496 PANTHER AMINOPEPTIDASE (DUF3754) 1 494 - -
Ssu9g0300 496 PANTHER AMINOPEPTIDASE 1 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0300 Ssu-Chr9 15163461 15172914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0300 - - gmx:100777206 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1839 4 33503375 33513860 Ssu9g0300 9 15163461 15172914 PCT