Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1839 ATGGCACATTTGCAAGGAACGGATCAAAAGAAGGGTGACGTTATACGTTTAGAGCGCGAATCTGTCATTCCAGTTCTGAAGCCTAAGCTTATCATGACACTGGCCAATCTTATTGAGCATAGTTCTGACCGAGCTGAGTTTTTGAAGCTCTGTAAGAGAATAGAGTACACAATTCGAGCTTGGTATCTTCTACAATTCGAGGACTTGATGCAACTTTACTCCCTCTTTGACCCTGTACACGGGGCACAAAAATTGGAACAACAGAAGTTAGCTCCTGAAGAAATTGATGTGCTTGAACAGAATTTCTTGACATACCTATTTCAGGTCATGGAAAAGAGCAACTTCAAGATAGTGACTGATGATGAGATTGATGTTGCACATTCAGGCCAGTATCTTCTAAATCTTCCCATTACTGTTGATGAATCTAAGCTTGACAAGAAACTTCTgaagaaatattttgaagagCATCATCATGATGACCTTCCAGATTTTTCTGATAAGtatgttaTCTTTCGGCGTGGCATTGGAATTGATCGAACAACTGACTACTTTGTCATGGAGAAAGTGGACATGCTTATTGGACGGTTTTGGGCATATCTGTTGAGACTAACTAGGTTGGAAAAGCTTTTATCCAGAAGGTCAAAAAGGCTTAATAAGAAAGATCCAAAGAAGGACAATGAAATTAACTCTGAAGCAGATGGGCAAGACCTTTATGTTGAACGGATACGTCTTGAAAATATGCAACTAAGTTTTCGTAATTTGCTGGGCAAGACCTTAATCCAAGAACCGACATTTGATAGGATAATTGTTGTCTACAGgagAGCCAATACCAAATCAAAAGAAGAACGTGGAATATTTGTGAAGCATTTCAAAAACATTCCAATGGCTGATATGGAAATAGTTCTTCCAGAAAAGAAAAACCCTGGATTAACTCCAATGGATTGGGTCAAGTTTCTTGGATCAGCTATAGTTGGGCTGGTTGCTGTAGTTAGTTCACTTGAAATGCCTTCAGCTGATTGGTGGGTCATCATTGCTGTTCTCTCCACAGTAATTGGTTATTGCGCTAAGACATACTTCACGTTCCAACAAAACTTGGCtcaataccaaaatttgattACACAGTCAATGTATGACAAACAACTTGACAGTGGAAAGGGTACACTTCTTCATTTGTGTGATGATGTCATTCAACAAGAAGTCAAAGAGGTAATAGTTTCATTCTTTATTCTGATGGAGCAGGGCAAAGCTACTAGACAGGATCTTGATCAATGGTGTGAGGAACTAATCAAAGAAGAGTTTGATGAGGAATGTAATTTTGATGTGGATGATGCCGTTCAGAAATTAGAGAATTTGGGAATTGTTTCTCGGGATTCTGTTGGTCGGTATCAATGTGTTGGGCTAAAACGGGCTAATGAAATCATTGGCACCACCACTGAAGAGCTTGTCCTCAAGGCCAAACAGGGAACCATTACTCCTTGA 1479 0.3867 MAHLQGTDQKKGDVIRLERESVIPVLKPKLIMTLANLIEHSSDRAEFLKLCKRIEYTIRAWYLLQFEDLMQLYSLFDPVHGAQKLEQQKLAPEEIDVLEQNFLTYLFQVMEKSNFKIVTDDEIDVAHSGQYLLNLPITVDESKLDKKLLKKYFEEHHHDDLPDFSDKYVIFRRGIGIDRTTDYFVMEKVDMLIGRFWAYLLRLTRLEKLLSRRSKRLNKKDPKKDNEINSEADGQDLYVERIRLENMQLSFRNLLGKTLIQEPTFDRIIVVYRRANTKSKEERGIFVKHFKNIPMADMEIVLPEKKNPGLTPMDWVKFLGSAIVGLVAVVSSLEMPSADWWVIIAVLSTVIGYCAKTYFTFQQNLAQYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVIVSFFILMEQGKATRQDLDQWCEELIKEEFDEECNFDVDDAVQKLENLGIVSRDSVGRYQCVGLKRANEIIGTTTEELVLKAKQGTITP 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1839 492 PANTHER AMINOPEPTIDASE (DUF3754) 8 491 - -
Ssu4g1839 492 PANTHER AMINOPEPTIDASE 8 491 - -
Ssu4g1839 492 Pfam Protein of unknown function (DUF3754) 265 386 IPR022227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1839 Ssu-Chr4 33503375 33513860 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1839 - - gmx:100819645 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1839 4 33503375 33513860 Ssu4g1839 4 33503375 33513860 ECH
Ssu4g1839 4 33503375 33513860 Ssu9g0300 9 15163461 15172914 PCT