Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0292 ATGTCGTGTGTGCCAGCACGTACGGGCCGACAACGACAGCGTTATGAAGACAACATGCGCCTCGTCTCTGGATGCATTCCCTATAGATGgaaaatgggaaaaatagaTCAAATGGGAGATACAGAGGAGATAATAGAAGTACTTATGGTTTCTTCACCAAAACGTGATGACCTTGTGTTTCCGAAGGGTGGATGGGAGGATGACGAGACTGTCACAGAAGCTGCTTGCCGTGAAGCGCTAGAGGAAGCAGGAGTTAAAGGGATTGTAaggGAAATTCCCTTGGGAAGATGGGAGTTCAGAAGCAAAAGCAGCAGGGATTCATGTAGCCAGGAAGGATGGTGTAGAGGGTACATGTTTGCCTTGGAGGTGACTGAAGAACTTGAGACTTGGCCAGAGCAGAAAGACCACCATCGCCAATGGtTAAACATAGAAGAGGCATTCAGACTCAGCCGATATGACTGGATGTGCAAGGCATTGGAGgtgtttttaagagttatgGCAGAGGACAGAAAGctaaagaaggaagaaaataatgttGATTCTTCTTCAATTTCAGTGCTAGATGTGTCAGAAAGTCAAAATATGCCATCCAAATGCTATAAAAGAACCTCTACTGCACAACACCATAGTATGTCATCAAGAACCAATATCCTGGCCCATGCTTCCCAGGAGATAGCTATCCATTTTGGTTGTTGA 696 0.4239 MSCVPARTGRQRQRYEDNMRLVSGCIPYRWKMGKIDQMGDTEEIIEVLMVSSPKRDDLVFPKGGWEDDETVTEAACREALEEAGVKGIVREIPLGRWEFRSKSSRDSCSQEGWCRGYMFALEVTEELETWPEQKDHHRQWLNIEEAFRLSRYDWMCKALEVFLRVMAEDRKLKKEENNVDSSSISVLDVSESQNMPSKCYKRTSTAQHHSMSSRTNILAHASQEIAIHFGC 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0292 231 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 191 - -
Ssu9g0292 231 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 165 - -
Ssu9g0292 231 ProSitePatterns Nudix box signature. 63 84 IPR020084 GO:0016787
Ssu9g0292 231 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 1 191 - -
Ssu9g0292 231 SUPERFAMILY Nudix 19 172 IPR015797 -
Ssu9g0292 231 Pfam NUDIX domain 47 155 IPR000086 -
Ssu9g0292 231 CDD Nudix_Hydrolase_9 21 155 - -
Ssu9g0292 231 ProSiteProfiles Nudix hydrolase domain profile. 18 163 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0292 Ssu-Chr9 14977711 14981101 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0292 K07766 - gmx:100780722 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1827 4 33226865 33231296 Ssu9g0292 9 14977711 14981101 PCT