Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0286 ATGGAGGTACACTCTCCGGTTATAGCCAAGAAGCTATGGAATGTGTTGAGGATCACTTTCTTCATGATCAGGAAGGGTTTGGTATCAAAGAGGAAGCTGATTATGGACATGAATTTGATGATGAAGAAAGGGAAACTGCTCAGAAAATCTATGAGCAATTTCATGTCATCTCattatcaacatcatcatcactCAAAGAGTTTGGCACGTGGTTATGGCATACAGGAATATGAATTCTCTTGCAGTAACAGCCCAAATCCTGTTTTTTACCATGTGCCAAAGAGAAAGCACCATTTCAACTTCCCTTGCATCAACACCCCAGAGGTTATTGAAGAGCCTAGGCCTGTGGTTTTGGTGCCCATGACACCTGAATACACTTTCAACCTTAGATTTGATGCATCTGATTTTGCTCCTGGAGAGAGGAAGAGCCCCCTCCTCTCACCCTTCTCTGTGAGGATATCCAACTACTCATCTGAGGATGAAAATGAAGAGGGTGGAAAAGGTCAAGTTGATGATCAGGCTGAGGACTTCATCAGAAGGTTCTATGAGCAGCTAAGAATGCAAAGCCACATGCAGTTGCTGCAGTACCAAGAGATGTAA 600 0.4217 MEVHSPVIAKKLWNVLRITFFMIRKGLVSKRKLIMDMNLMMKKGKLLRKSMSNFMSSHYQHHHHSKSLARGYGIQEYEFSCSNSPNPVFYHVPKRKHHFNFPCINTPEVIEEPRPVVLVPMTPEYTFNLRFDASDFAPGERKSPLLSPFSVRISNYSSEDENEEGGKGQVDDQAEDFIRRFYEQLRMQSHMQLLQYQEM 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0286 199 Pfam Cotton fibre expressed protein 168 199 IPR008480 -
Ssu9g0286 199 PANTHER OS01G0930500 PROTEIN 1 199 - -
Ssu9g0286 199 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0286 Ssu-Chr9 14680673 14681272 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0286 - - pvu:PHAVU_004G067900g 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1819 4 33086978 33087607 Ssu9g0286 9 14680673 14681272 PCT