Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0249 ATGGGAAGGAGTCTGAGTCCAATgctaaaaagagagataaaaaatctTGACAAAGATGCAGATAGTCGCAAATCCGCAATGAGAGCATTGAAATCATATGTGAAAGATTTGGACATGAAGACAATTCCTATCTTTCTTGCACAAGTTTCGGAGACCAAGGAAACTGGTTCTTTGTCTGGAGAATTCACAATTTCACTGTATGAGGTTCTAGCTCGGGTTCACGGAGTCAAGATTGTTCCCATGATAGACAGCATTATGCAATCCATTGTTCAAACCTTAGCTTCAAGTGCAGGGTCTTTCCCTCTTCAGCAGGCATGCTCAAAGGTGGTTCCGGCCATTGCAAGGTATGGGATGGACCCCACAACCCCGGAAGAGAAGAAGAGGCAAATAATTCACTCTCTTTGTAAGCCCCTTTCGGATTCTCTCTCGAGTTCTCAGGAGAGTTTGACATGTGGTGCGGCCCTTTGCTTGAAGGCTCTTGTGGACTCAGATAACTGGCGTTTCGCGTCGGATGAGATGGTTAATAGGGTTTGCCAGAATGTTGCTGTGGCATTAGAGGGAAAGTCCACTCAAACCAATTCACACATGGGTCTGGTTATGGCCCTGGCGAAGCGCAATGCTTTGATTGTTGAAGCCTATGCCAGATTGCTCATGCAATCTGGACTACGAATACTAAATGCTGGCGGTGAGCCTTTGGAGGGGAATTCTCAGAAGCGATTTGTAGCCATTCAAATGGTGAACTTCTTGATGAAATGTTTAGATCCCAGGAGCATATTTTCGGAGGTTGAGCAGATAATTGAGGTGATGGAGCTGTGTCAATCTGACAAAATGGCATATGTCAAAGGAGCTGCATTTGAGGCTTTGCAAACTGCTAAGATGATTGCCACTGATAAAAAATCAAGATGTGTGAGGAGTCCTGCTTCTGTGACGGGGTCGAATTTCAGTAGGAAAGACTATATGGAAAGAGAAAGTTTTTCTGGTGATGGAGACCATTCTCCCTCATCTATTTATCCAGAGTCACGTACCTTGGACTTCTTCCATGGCTATGGATCCCCTGTTGAGTCACCCATTTCAACAAGTCTGCCTTCTCAGAACTTCTACGAGCGAAGGAGTGTGAATAGGAAACTTTGGAGTCATGAAAATGGAGGGGTTGATGTGTCTCTCAAGGATGGTTTGTTCTCCAAGTCAGGGCACGGAAATGCCTCGTTGGACCACACTACGGATCATGAATTTTCTAATGGAGGGGCAGATTTAACAGGTGAATTTGCTGGTTTCATGCACAGAAGTCCTTGGCATGGAGTATCCAGAAGTGCCAGCACAAGTCCCATAAGATCTCGCACGCAGGTTAATGTTGACAACATCAAACTCTTTATAACTCCTAGGAGGCTCATTCACTCTCTTCAAGACCCAAATGATGAGACTTCAGATTGCTCTGAGAAACTGAATAGAAGGATCAAGAGTCTATCATCAGGCAATATTAAGTGGACCCCAGCATCTTATTCTAAATATGATGAAAATGGTATTGCAGATCATGTAAGCCATGATTCTAATGAAAATGGAGCCTTATATGACGATGTTCAGTTCCAAGGTGAACCGGAGTCAGTCTCATCAACAGATGACTTTCCTGGTAATACTGATACGCAGAGGCCTTCTGAGGTTGGTCCTGCAAATAGAAATGGTACTCAACCTGTTCTAATGGGAAGGCCATTTCAAAAGActaaacataaattagtttGTGGCCTTTCTTTTGCTCTTCTAGCAATAGCTACTCCTCTACTATGGATCAACAGTCAGGAAGAAGGCCATTTTCTTGTCCCGACATAA 1824 0.4337 MGRSLSPMLKREIKNLDKDADSRKSAMRALKSYVKDLDMKTIPIFLAQVSETKETGSLSGEFTISLYEVLARVHGVKIVPMIDSIMQSIVQTLASSAGSFPLQQACSKVVPAIARYGMDPTTPEEKKRQIIHSLCKPLSDSLSSSQESLTCGAALCLKALVDSDNWRFASDEMVNRVCQNVAVALEGKSTQTNSHMGLVMALAKRNALIVEAYARLLMQSGLRILNAGGEPLEGNSQKRFVAIQMVNFLMKCLDPRSIFSEVEQIIEVMELCQSDKMAYVKGAAFEALQTAKMIATDKKSRCVRSPASVTGSNFSRKDYMERESFSGDGDHSPSSIYPESRTLDFFHGYGSPVESPISTSLPSQNFYERRSVNRKLWSHENGGVDVSLKDGLFSKSGHGNASLDHTTDHEFSNGGADLTGEFAGFMHRSPWHGVSRSASTSPIRSRTQVNVDNIKLFITPRRLIHSLQDPNDETSDCSEKLNRRIKSLSSGNIKWTPASYSKYDENGIADHVSHDSNENGALYDDVQFQGEPESVSSTDDFPGNTDTQRPSEVGPANRNGTQPVLMGRPFQKTKHKLVCGLSFALLAIATPLLWINSQEEGHFLVPT 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0249 607 PANTHER PROTEIN SINE1 1 607 - -
Ssu9g0249 607 Gene3D - 4 301 IPR011989 -
Ssu9g0249 607 MobiDBLite consensus disorder prediction 531 566 - -
Ssu9g0249 607 MobiDBLite consensus disorder prediction 531 558 - -
Ssu9g0249 607 PANTHER GEMIN2 1 607 - -
Ssu9g0249 607 SUPERFAMILY ARM repeat 16 290 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0249 Ssu-Chr9 13349892 13352673 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0249 - - gmx:100820627 1030.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1783 4 32066884 32078299 Ssu9g0249 9 13349892 13352673 PCT