Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1783 ATGGCAATTGCACGCACTGGAGTCTACGTCGACGACTATGTGGAGTACGCGAGCACATTACCCGCTGAGCTTCAGAGACTGCTCAACACTGTCCGAGAACTCGATGAACGATCCCAATCTATGATAAACCAGACCAGGCAGCAGACGAAGTACTGTATGGGGTTCTCATCACATGGCTCTAAGAAGggtaattacaattataataacaattatggGAATGAGGACGATGATGCCGCCATTgagaaaatgcaaaaagaaaTCGAGGCAAATCAGGATAGTGCATTGAGTCTTTGTACTGAAAAGGTTTTGTTGGCGCGACAAGCATATGACCTTATAGATAGCCATGTAAAACGACTTGATGAGGATTTAAACAACTTTGCCGAAGATTTAAAGCAAGagGGTAAAATACCACCAGATGAACCAGCAATTCTTCCCCCATTGCCTATTGTCCCTAAAACTGAAAAGCGCAAGCCCATATATATAACTCCTCAATCAAAGAGACTTGATTACAGGGATAGAGATTGGGATCGGGAGCGTGATAGGGACTTTGAGCTAATGCCTCCACCAGGAAGTCATAAGAAGGAGTATGCTACCCCGATGGATGTTGATCAACCCATTGATCCAAATGAACCTACATACTGTGTTTGTCATCAGGTTTCTTTTGGAGATATGATTGCTTGTGACAATGAAAATTGCCAAGGAGGTGAATGGTTCCACTATTCATGTGTTGGGCTAACGCAAGAGACAAGGTTCAAGGGAAAATGTTCAAGAATGGGAAGGAGTCTCAGCCCTTTGGTGCGGCAAGAGCTGGCAAATCTTGACAAAGATGAAGATAGTCGCAAATCCGCCATGAAAGCGTTGAAGTCCTACGTGAAAGATTTGGATTTCAAGGCCATTCCTGTGTTTCTTGCAAAAGTTTCTGAGAGCAAGGAAAATTGTTCTGGGGAATTCACAATTTCAATCTATGAAGTTCTTGCGCGGGTTCACGGCGTCAAAATTGTTCCCTTGATAGACAGCATCATGGGAACCATAGTCAAGACTTTGGCTTCAAGTGCAGGCTCTTTCCCTCTTCAACAGGCTTGCTCAAAGGTGGTTCCTGCAATTGCAAGATATGGAGTTGACCCCTCAACCCCAGAAGACAGAAAGAGGCAGATAATTCAGTCCCTTTGCAAGCCTCTTTCCGACTCCCTCTCAAGTTCTCAAGAGAGCCTCACCTCAGGTTCTGCACTTTGCTTGAAGGCTCTTGTGGATTCGGATAACTGGAGGTTTGCTTCTGATGAATTGGTCAATAGGGTTTGCCAGAATGTTGCTGTGGCATTAGATGGAAGGTCTGGTCAAACCAACTCACACATGGGTCTGGTTATGTCGTTGGCCAAGCGCAATGCTTTGATCATTGAAGCATATGCAAGGTTGCTCATACAATCTGGACTAAGAATACTGAATGCTGGCCTTGTGGAGGGGAATTCTCAGAAGCGGCTTTCGTCCATTCAGATGATCAACTTCTTGATGAAAAGTTTGGACTCCAGGAGCATATTCTCAGAGATTGAATTGATAATTGAGGAGTTGGACAAGTGCCAATCTGATAAAATGGCATTTGTGCAAGGTGCAGCACTTGAGGCTTTGCAAACTGCCAAGAGAATTGCGAGTGATAAAAAGCCTAGATATGCCAAAAGTCCTGCTTCAGTGACAGGGTCAAATTTTAGTAGGAAAGAGGGACACTATATGGAGGGAGAGAATACTTCTTCTGGTGATGGAGACCATACTCCTTCCTCTCTTTCACCAGAATCGCGTACATTGGACTTTTTCCATGGATATGAATCCGTTACTGAGTCCCCTATTTCAAGCAACTTAGACTATGAACGGAGGAGCGTGACTAGGAAGCTTTGGAGTACTGAAAATGGAGGGGTTGATGTGTCTCTCAAGGATGGTTTTTTTTCAGAAGTAGGAAAAGAAAGTGCTCTGTTAGAGCATTCATTGATTGACGAGTTTTCTAATGGACAGGGAGATTTTACAAAGGAGTTTTCTGGGTTCATGGGCAGAAATCCCAGGCATGGAGTGTCCAGAAGTACCACCACAAGTCCACTAAGGTCACGCGCTCAGGCAACTGTTGACAGCATAAAAATCTTCAAGACCCCTAGGAAGCTCATTCACTGTCTTCAAGATTCAAGTGATGTGACTTTGGGTTGCTCTGAGAAACAGAATAGAAGGTTCAGGAGTTTGTCCTCAGGCAATATTGACTGGAGTCCAGCTTCTAAATATGACCAGAACGGTTTCTCAGATCATGTGAAGTGTGATAGTGAAGTGAATGAAAGTTTATGTGCTGAGGTTGAGTTCCAAGGTGGCTCAGAGTCAGTCTCATCAACAGATGACCTTCCTGTAGATGCCAATATGCCTACCAAAGTGGTTCCTGAAAATAGAAATGTTACACCAACTGCACTACAAAAGACTAAATATAAATTGGTTTGTGGTCTTTCATTTGTTCTTCTTGCAATGGCTACTCCTTTACTTTGGATCAATAGTCAGGATGAAGGTCATTATCTTGTCCCAACATAA 2553 0.4309 MAIARTGVYVDDYVEYASTLPAELQRLLNTVRELDERSQSMINQTRQQTKYCMGFSSHGSKKGNYNYNNNYGNEDDDAAIEKMQKEIEANQDSALSLCTEKVLLARQAYDLIDSHVKRLDEDLNNFAEDLKQEGKIPPDEPAILPPLPIVPKTEKRKPIYITPQSKRLDYRDRDWDRERDRDFELMPPPGSHKKEYATPMDVDQPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGLTQETRFKGKCSRMGRSLSPLVRQELANLDKDEDSRKSAMKALKSYVKDLDFKAIPVFLAKVSESKENCSGEFTISIYEVLARVHGVKIVPLIDSIMGTIVKTLASSAGSFPLQQACSKVVPAIARYGVDPSTPEDRKRQIIQSLCKPLSDSLSSSQESLTSGSALCLKALVDSDNWRFASDELVNRVCQNVAVALDGRSGQTNSHMGLVMSLAKRNALIIEAYARLLIQSGLRILNAGLVEGNSQKRLSSIQMINFLMKSLDSRSIFSEIELIIEELDKCQSDKMAFVQGAALEALQTAKRIASDKKPRYAKSPASVTGSNFSRKEGHYMEGENTSSGDGDHTPSSLSPESRTLDFFHGYESVTESPISSNLDYERRSVTRKLWSTENGGVDVSLKDGFFSEVGKESALLEHSLIDEFSNGQGDFTKEFSGFMGRNPRHGVSRSTTTSPLRSRAQATVDSIKIFKTPRKLIHCLQDSSDVTLGCSEKQNRRFRSLSSGNIDWSPASKYDQNGFSDHVKCDSEVNESLCAEVEFQGGSESVSSTDDLPVDANMPTKVVPENRNVTPTALQKTKYKLVCGLSFVLLAMATPLLWINSQDEGHYLVPT 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1783 850 MobiDBLite consensus disorder prediction 581 596 - -
Ssu4g1783 850 MobiDBLite consensus disorder prediction 676 695 - -
Ssu4g1783 850 Gene3D - 258 570 IPR011989 -
Ssu4g1783 850 PANTHER PROTEIN SINE1 258 850 - -
Ssu4g1783 850 SMART PHD_3 213 259 IPR001965 -
Ssu4g1783 850 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 205 257 IPR013083 -
Ssu4g1783 850 Coils Coil 24 44 - -
Ssu4g1783 850 MobiDBLite consensus disorder prediction 782 802 - -
Ssu4g1783 850 PANTHER GEMIN2 258 850 - -
Ssu4g1783 850 SMART ING_2 9 126 IPR024610 -
Ssu4g1783 850 SUPERFAMILY FYVE/PHD zinc finger 188 249 IPR011011 -
Ssu4g1783 850 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 126 IPR024610 -
Ssu4g1783 850 Gene3D - 5 124 - -
Ssu4g1783 850 SUPERFAMILY ARM repeat 270 546 IPR016024 -
Ssu4g1783 850 CDD ING_plant 17 123 - -
Ssu4g1783 850 CDD PHD_ING 213 255 - -
Ssu4g1783 850 MobiDBLite consensus disorder prediction 552 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1783 Ssu-Chr4 32066884 32078299 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1783 - - gmx:102659858 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1783 4 32066884 32078299 Ssu9g0249 9 13349892 13352673 PCT