Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1291 ATGTCTCTGTTTGCTGCATATTCCATTTGTAAAGTTGCCAAGGATGCAGCTGGAATTGCAGGGAATGTCTTTGCCTTTGGGTTGTTTGTGTCTCCCATACCCACATTTAGGAGGATTATCAGAAATGGGTCAACAGAAATGTTCTCGGGGTTGCCATATATTTATTCTCTTCTGAACTGCTTGATCTGCTTGTGGTATGGCACACCTCTGATATCTGCTGATAATTTTTTGGTTACCACTGTTAATTCAATTGGAGCAGTCTTTCAGTTTGTGTACATAGTCCTCTTCCTGATGTATGCTGAGAGAGCAAAGAAGATGTTTGCATTATTGGTGGCAGTTCTTGGCATATTTGTAATCATATTAGTTGGAAGCTTGCAAATGGATGACATTCCAATGCGTCGGTTATTTGTGGGATTATTGAGCTGTGCATCTCTCATTTCAATGTTTGCCTCTCCATTGTTTATAATTAAATTGGTCATTCAGACAAAGAGTGTGGAATTCATGCCATTTTATCTCTCACTTTCCACCTTCTTAATGAGcacctctttctttctttatggaTTATTCAATGATGATGCCTTCATTTATGTGCCAAATGGGATAGGAACCATTTTGGGATTGATACAGTTGATACTATACTTCTATTACAAGAATAAATCTAGAGAAAACTCCAGAGAACCTTTGATAGTGTCATATGCATGA 702 0.3689 MSLFAAYSICKVAKDAAGIAGNVFAFGLFVSPIPTFRRIIRNGSTEMFSGLPYIYSLLNCLICLWYGTPLISADNFLVTTVNSIGAVFQFVYIVLFLMYAERAKKMFALLVAVLGIFVIILVGSLQMDDIPMRRLFVGLLSCASLISMFASPLFIIKLVIQTKSVEFMPFYLSLSTFLMSTSFFLYGLFNDDAFIYVPNGIGTILGLIQLILYFYYKNKSRENSREPLIVSYA 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1291 233 Pfam Sugar efflux transporter for intercellular exchange 18 102 IPR004316 GO:0016021
Ssu8g1291 233 Pfam Sugar efflux transporter for intercellular exchange 136 220 IPR004316 GO:0016021
Ssu8g1291 233 Gene3D - 11 106 - -
Ssu8g1291 233 PANTHER RAG1-ACTIVATING PROTEIN 1 9 233 - -
Ssu8g1291 233 Gene3D - 135 228 - -
Ssu8g1291 233 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET2 9 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1291 Ssu-Chr8 23538046 23539240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g1291 1 232 Miscellaneous Gene Families AT3G14770 65.532 5.25e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1291 K15382 - gmx:100305842 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1291 8 23538046 23539240 Ssu3g1644 3 47371864 47372773 ECH
Ssu8g1291 8 23538046 23539240 Ssu8g1291 8 23538046 23539240 ECH