Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g1020 ATGGCGGCGGCCTCCGACAGCTGCTGCGGGCGCTGCTTCACCTTCGTAGTAACCATCGGCCTCACCGCTCTGTTCCTCTGGCTGAGTCTCCGCGTCGACGAGCCCCGATGCTACCTCGAGTCGATTTACGTTCCTGCCCTCAACAAGTCGCTCAATTCCGGTCCCAACAATACCCTCTTCTTCGTGCTCAGGCTCGTCAACAACAACAAGGACAAGGGCATCAAATACGACGACGTTAGCGTCTCCTTCGGGGTCTTCGTGGTCGCGAACGCCACGCGCGCGCTCGGCAACGCCACCGTGCCGCGGTTCTACCAGGGCCACGAGAAGAAGGCCCACAAGGGAGGGTCGCTCCTCGCCGCCGGGAACGTGACTGCGGCGGTCGACGGCAGGGTGGTGTACCGCGTGGACTTCGCGACGGAGGTCAAGTACAAGATCCTGTTCTGGTACACGAAACGGGACCGTTTGTGGGGAGGGGCAAATGTGGAAATCAATGATTCTGGGACAAAGGCGTACCGCAAACCCGTGAGGCTAGGGGGGAACTCGCCGGTGGTGATCGAGTCCGGCGCACCAAAGCTCCGGGGACGCTATCGTGCGCTTGTGTCTTTTTGTGTTGCTGCGTTCCTCCTGGGTACTGGGTTCAGTTGA 645 0.6078 MAAASDSCCGRCFTFVVTIGLTALFLWLSLRVDEPRCYLESIYVPALNKSLNSGPNNTLFFVLRLVNNNKDKGIKYDDVSVSFGVFVVANATRALGNATVPRFYQGHEKKAHKGGSLLAAGNVTAAVDGRVVYRVDFATEVKYKILFWYTKRDRLWGGANVEINDSGTKAYRKPVRLGGNSPVVIESGAPKLRGRYRALVSFCVAAFLLGTGFS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g1020 214 PANTHER OS05G0367900 PROTEIN 7 201 IPR044839 GO:0098542
Ssu8g1020 214 PANTHER NDR1-LIKE PROTEIN 7 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g1020 Ssu-Chr8 17542835 17543479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g1020 - - vun:114183543 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1020 8 17542835 17543479 Ssu8g1020 8 17542835 17543479 ECH
Ssu8g1020 8 17542835 17543479 Ssu3g1989 3 65204185 65205024 PCT