Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1989 ATGGAAGCTCCAAAACTCCTTGCACGCtggcacaagagagagaaaaacgAAGAAACGCAGAAAAGGCAAAGAATTTCTAACAGCAACACGCCAGTACAGATTCCATGTCATCTCAGCACCTCACCCCCCCTCCCCACAAAACCCACCCACTCTCGTTCCCCTTCTCCTTCCCCGGTCACGTGCATGGCACCCGAACGCGACAACTGCTGCACGTGCTGCCTCAGCTCCCTCGTCTCCCTGGGCCTCTCCGCCCTCTTCCTCTGGCTCACGTTCCGCACCGAACCCCCCAAGTGCCTCCTCCAGTCCCTCTACCTCCCCTCCCTCAACGCCACCTCCCGCCACAAAAACGACACCGTCGTCTTCCAGCTCGAGCTGCAAAACGACAACAAGGACAAGGGCGTCAAATACGACGCCGTTCGCCTCTCCTTCGCGCTCTTCGTCGACAACGCCACCACGCGGCCCCTCGCCAACGCCACGCTCGGCGCGTTCTATCAGGGCCGCGGCAAGACCGCGCGCAGGTGGGGCTCCGCCGTCGCCCGCGGCGGCGGAGTGAACCGCACGGCGGCGGCGAAGGTGGGCGGGAGGGTGTTCCTGCGCGTGGAGTTCGCGACTAGGGTGAAGTACAAGATCTGGATGATGTTTTACGTGAGACGGCACCGTTTGGTCGGAGGGGCTAACGTCGAGGTGAATGCTAGCTCCGGGGAGAAGGTGGGGCCCAAGGGGATTAGGCTCGGGGACGCGCCGCCCAGGCTCGGGTCCCAAGCTGCCGAGGCTCGGGGTTGCTATGCGGCGGTTCTCGGAGTTCTTGTCACTGGCTTGTTTCTCACTGCGTTTACTTGA 840 0.6107 MEAPKLLARWHKREKNEETQKRQRISNSNTPVQIPCHLSTSPPLPTKPTHSRSPSPSPVTCMAPERDNCCTCCLSSLVSLGLSALFLWLTFRTEPPKCLLQSLYLPSLNATSRHKNDTVVFQLELQNDNKDKGVKYDAVRLSFALFVDNATTRPLANATLGAFYQGRGKTARRWGSAVARGGGVNRTAAAKVGGRVFLRVEFATRVKYKIWMMFYVRRHRLVGGANVEVNASSGEKVGPKGIRLGDAPPRLGSQAAEARGCYAAVLGVLVTGLFLTAFT 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1989 279 MobiDBLite consensus disorder prediction 23 46 - -
Ssu3g1989 279 MobiDBLite consensus disorder prediction 1 59 - -
Ssu3g1989 279 MobiDBLite consensus disorder prediction 1 22 - -
Ssu3g1989 279 PANTHER OS05G0367900 PROTEIN 66 276 IPR044839 GO:0098542
Ssu3g1989 279 PANTHER NDR1-LIKE PROTEIN 66 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1989 Ssu-Chr3 65204185 65205024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1989 - - gsj:114417045 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g1020 8 17542835 17543479 Ssu3g1989 3 65204185 65205024 PCT