Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0886 ATGATTTTGAATAAAGGGTCAATGCATTCTAATCTTGACTGTTTCGTACGGTGTACCACACCTGTGGTTCAATCCCAGTTTCTTCCTAAGTCCGAGATTACGAGCCTTAACCGTTTGTGGCATCCGTGGGAGAGAGAAAGCGTGGAGTATTTCACGTTGGGGGATCTTTGGAATTGCTATGACGAATGGAGTGCTTACGGGGCAGGAGTTCCCATCACCTTGACTAGCGGGGAGACACTTGTGCAGTACTATGTGCCTTATCTCTCCGCAATTCAGATATTCACTAGCAATAGTTTCAGGGAAGAGGCCGAGTCAGGTGACTGTGAGACAAGGGATTCCTATAGTGATTCTTTCAGCGATGAGAGTGAGTGTGATAAGTTATGGAGGTGGGATGGAACTTCCTCAGAAGAGGGATGGTCTGAGCAAGACAGTCTCTGGCATTTCAATGACAGATTGGGCCACCTCTATTGCCAGTATTTTGAAAGAGCAACACCATATGGGAGAGTTCCTCTTATGGATAAGATTACTGGGTTAGCTCAAAGATACCCGGGGTTGATGTCATTAAGAAGTGTAGATCTTTCGCCAGCAAGTTGGATGGCCGTTGCCTGGTACCCAATATATCATATCCCCATGGGAAGAACAATAAAAGACCTTTCTACATGCTTCCTCACTTACCACACACTTTCATCTTCATTTCAAGGCATGGACCTTGACGATGATATTGAGGGTGGCCacgagaagaaaaaggaaggggaAGGCATATCACTGCCAGCATTTGGTTTGGCAACGTACAAGATGCAAGGGGGGAATGTGTGGGTCGCAGGCAATTGTGGTCGGGaccaagaaaggctattgtcactATTGAGCGTGGCAGATTCATGGTTGAAGCAACTCAGGGTCCAGCATCATGACTTTAATCACTTCATGGGCATTCGGCATGGCTAA 945 0.4455 MILNKGSMHSNLDCFVRCTTPVVQSQFLPKSEITSLNRLWHPWERESVEYFTLGDLWNCYDEWSAYGAGVPITLTSGETLVQYYVPYLSAIQIFTSNSFREEAESGDCETRDSYSDSFSDESECDKLWRWDGTSSEEGWSEQDSLWHFNDRLGHLYCQYFERATPYGRVPLMDKITGLAQRYPGLMSLRSVDLSPASWMAVAWYPIYHIPMGRTIKDLSTCFLTYHTLSSSFQGMDLDDDIEGGHEKKKEGEGISLPAFGLATYKMQGGNVWVAGNCGRDQERLLSLLSVADSWLKQLRVQHHDFNHFMGIRHG 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0886 314 PANTHER T15D22.8 4 312 - -
Ssu8g0886 314 PANTHER - 4 312 - -
Ssu8g0886 314 Pfam Protein of unknown function (DUF789) 10 308 IPR008507 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0886 Ssu-Chr8 15055877 15058256 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0886 - - gmx:100786536 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0886 8 15055877 15058256 Ssu8g0886 8 15055877 15058256 ECH
Ssu8g0886 8 15055877 15058256 Ssu3g2164 3 70525570 70528740 PCT