Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0883 ATGGCTTGTAGACCTTCCTCTTTCCTTGCACTTCTTCTCATCTCCACCATGCTTTTTGCCACCCCATGGCAAGCAGTTGCTGGACGCCACATTAGTCCAAAGAACTCAAACACACGGGACGAGAAAGTGCCTCAGTTTTTGTTCCCCTCTGATGGTAGTGTCTATATTCCGGGCATTGGGAGAGTAGGATTGCCTCCTTTCTTTGGGTTTACCCCTCAAAATCCAAACACTGGGGGCAGTGGAGTAGGGTCAGGACCAGCAGGTCACAGTTATGTTCCAGGTGGTGATGACACGTTTGTCCCAAACCCTGGTTTTGAGGCTCCAAGCCctggcagtggtggtggagtTCCAGCTCCGGTTCATCCGTGA 369 0.4851 MACRPSSFLALLLISTMLFATPWQAVAGRHISPKNSNTRDEKVPQFLFPSDGSVYIPGIGRVGLPPFFGFTPQNPNTGGSGVGSGPAGHSYVPGGDDTFVPNPGFEAPSPGSGGGVPAPVHP 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0883 122 MobiDBLite consensus disorder prediction 70 122 - -
Ssu8g0883 122 PANTHER CELL WALL PROTEIN-RELATED 1 122 IPR034565 -
Ssu8g0883 122 PANTHER CELL WALL PROTEIN-RELATED 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0883 Ssu-Chr8 15001144 15001512 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0883 - - gmx:100305796 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2166 3 70624099 70624485 Ssu8g0883 8 15001144 15001512 PCT