Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0866 ATGGAGGTGGAGACTGAAAAATCAGGGTCTGATGGGAAGGTTTGGAGTTTTTGTAGAATGCCATTTTGGCAAACAACTCAcactccttcttcttcttcttcttcttcttcttacatGCACAATGTCCATCATCAAAACCAGAATAATCTTCAATCTCTTGATAGATCCAGTCATCATTCTTCAACCACAGTTTCATCCGTGGCCAAGTCTCTGCTCCCTACAAAGAGGAGGCTCCGTCTTGATCCTTCCAACAAGCTCTACTTTCCATaTGAACCTGGTAAGCAAGTTAGGAGTGCAATCGCAATTAAAAACACTTGCAAGTCTCACGTAGCTTTCAAGTTTCAAACAACTGCACCCAAGAGCTGTTATATGCGCCCTCCAGGTGGTATTCTTGCCCCTGGTGAAAGTATAATTGCCACTGTATTCAAGTTTGTCGAGCCACCAGAGAACAATGAGAAACCAATTGATCAAAAAAGCAAGGTTAAGTTTAAAATCATGAGCCTAAAAGTGCAAGGTGAAATGGACTACGTACCGGAACTGTTTGATGAGCAAAGAGATCAAGTGGCAATAGAGCAAATTCTGCGGGTTATTTTTCTGGACCCTGAACGGCCTAGCCCTGTCCTGGATAAGCTTAAACGGATGTTGGCCGAGGCTGAGGCTGCACTCGAAGCGCGAAAGAAACTGCCGGAGGAGAAAGGTCCTCAAGTAGCCGGGGAGGGCCTTGTTATAGATGAATGGaaagaaagaagagaaagataccTGGCTCAGCAGCAGGTTCAAGGCGTTGATTCAGTGTAA 798 0.4211 MEVETEKSGSDGKVWSFCRMPFWQTTHTPSSSSSSSSYMHNVHHQNQNNLQSLDRSSHHSSTTVSSVAKSLLPTKRRLRLDPSNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPENNEKPIDQKSKVKFKIMSLKVQGEMDYVPELFDEQRDQVAIEQILRVIFLDPERPSPVLDKLKRMLAEAEAALEARKKLPEEKGPQVAGEGLVIDEWKERRERYLAQQQVQGVDSV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0866 265 ProSiteProfiles Major sperm protein (MSP) domain profile. 77 199 IPR000535 -
Ssu8g0866 265 SUPERFAMILY PapD-like 66 207 IPR008962 -
Ssu8g0866 265 Coils Coil 208 228 - -
Ssu8g0866 265 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 30 264 - -
Ssu8g0866 265 Pfam MSP (Major sperm protein) domain 78 188 IPR000535 -
Ssu8g0866 265 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 30 264 IPR016763 GO:0005789
Ssu8g0866 265 Gene3D Immunoglobulins 73 203 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0866 Ssu-Chr8 14708159 14711593 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0866 - - gmx:100816998 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0866 8 14708159 14711593 Ssu8g0866 8 14708159 14711593 ECH
Ssu8g0866 8 14708159 14711593 Ssu3g2184 3 70925405 70928423 PCT