Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2184 ATGGCGGTGGAGAGCGACAGAACGGGTTCTGATGGGAAAGCTTGGAGCTTTTGCAGCATGCCATTTTGGCAAACAACAACTCATGCTTCTTCGTCTTCTTCTTCAACCACTTCTTCTATGCATCACAATAGTGTTCACCATCAGAGTCAGATTCTTCAGTCTCTTGATAGATCCACTCATCAGCCTTCCACCACTGTTTCTTCTGTGGCTAAGTCTCTTCTCCCCACAAGGAGAAGGCTCCGTCTTGATCCTCCCAACAAGCTCTACTTTCCTTATGAACCTGGTAAGCAAGTTAGGAGCGCCATCGCAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACTGCACCCAAGAGTTGTTATATGCGCCCTCCAGGAGGTATTCTTGCACCTGGTGAAAGTATAATTGCAACCGTGTTTAAATTTGTGGAGCCACCAGAGAACAATGAGAAACCCATTGATCAAAAAAGCAGGGTTAAGTTTAAAATCATGAGCTTAAAAGTGAAAGGCGAAATGGACTATGTACCAGAACTGTTTGACGAGCAAAGGGATCATGTAGCAGTGGAGCAAATTTTGCGTGTGGTTTTTCTGGACCCTGAACGCCCTAGCCCTGCCTTGGATAAGCTTAAACGGCAGCTAGCCGAGGCTGAGGCTGCGTTGGAAGCAAGAAAGAAGCCTCCAGAGGAGACAGGCCCTAGAGTAGCTGGTGAAGGACTTGTTATAGATGAATGGaaagaaagaagagaaagataccTGGCCAGGCAGCAGGTTGAAGTGGTAGATTCagtgtaa 804 0.4465 MAVESDRTGSDGKAWSFCSMPFWQTTTHASSSSSSTTSSMHHNSVHHQSQILQSLDRSTHQPSTTVSSVAKSLLPTRRRLRLDPPNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPENNEKPIDQKSRVKFKIMSLKVKGEMDYVPELFDEQRDHVAVEQILRVVFLDPERPSPALDKLKRQLAEAEAALEARKKPPEETGPRVAGEGLVIDEWKERRERYLARQQVEVVDSV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2184 267 MobiDBLite consensus disorder prediction 29 69 - -
Ssu3g2184 267 Pfam MSP (Major sperm protein) domain 80 190 IPR000535 -
Ssu3g2184 267 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 34 266 - -
Ssu3g2184 267 Gene3D Immunoglobulins 75 205 IPR013783 -
Ssu3g2184 267 SUPERFAMILY PapD-like 68 208 IPR008962 -
Ssu3g2184 267 ProSiteProfiles Major sperm protein (MSP) domain profile. 79 201 IPR000535 -
Ssu3g2184 267 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 34 266 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2184 Ssu-Chr3 70925405 70928423 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2184 - - gmx:100820576 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2184 3 70925405 70928423 Ssu3g2184 3 70925405 70928423 ECH
Ssu8g0866 8 14708159 14711593 Ssu3g2184 3 70925405 70928423 PCT