Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0852 ATGCAATCATTCACTTCCTTTCTAGCGTGCCTCGTTTTCTTCGCGTCAATATCCCGCACTGGTCCACAACCTCTGGACGCGAACACCGTCCCCGCATATCCGACTCAAACCCAGACCCAAATCTGCCGCCTCGACCTCTCCAACGAGCTCTTTGGTGGCCTCAACCACGCCTGCGGCACCACCCTGGACCGCAGCCGCTGCTGCCCTGTCCTCGCCGCCTGGCTCTTCGCCGCCCACTCCCGAACCGCCCTCGAAGTCTCCGCCGGGCCGCCGCCGCCCTCCGGCGACCTCCCCATGATGCCGGACGACTCCCAGAAGTGCGTCGACTCGCTCCAAGACTCGCTTCGGAATCGGAGCATCCGAATCCCACAACCAAACGCCACCTGCGACGCCATACTCTGCTTCTGCGGCATAAGGCTCCACCAAATAACCTCCCTCAGCTGCCCCAACGCGTTTAACGTCACCGCGTTTCGAAACGTCTCCGGCACTCACAACGCCACCCCCACCGCTGTCGTTCGCAACTTGGAAAAGAATTGCCGTAACGCTTCTTACGCTGGCTGCACCAAATGCCTTGATGCCCTACAAAAGATAAAAGGATATAAGAAGgagagtgagagtgagaggGCGAAGAAGATGTTCAACAGGGACTGCCAACTGATGGCGCTGACGTGGCTGCTAGGGAGGAACAAAACGGCGTACATACCGACCGTTTCGGCGGTTTTGCGGGCTGTGATGTACAGTGCGCATCCACACGAATCCAAGTGTAGCCCGGACCAGGAGAACATGCCCTTGGCCGTTGATTCGCTGCAATTCGAGACGAGCCAGGGTTCATCTTCGCCGTTGAGGTTGTTTTGGATTATGCTTGTGATCATTCTGAACTGCTTCTGA 888 0.5664 MQSFTSFLACLVFFASISRTGPQPLDANTVPAYPTQTQTQICRLDLSNELFGGLNHACGTTLDRSRCCPVLAAWLFAAHSRTALEVSAGPPPPSGDLPMMPDDSQKCVDSLQDSLRNRSIRIPQPNATCDAILCFCGIRLHQITSLSCPNAFNVTAFRNVSGTHNATPTAVVRNLEKNCRNASYAGCTKCLDALQKIKGYKKESESERAKKMFNRDCQLMALTWLLGRNKTAYIPTVSAVLRAVMYSAHPHESKCSPDQENMPLAVDSLQFETSQGSSSPLRLFWIMLVIILNCF 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0852 295 PANTHER GPI-ANCHORED PROTEIN 1 293 IPR040376 -
Ssu8g0852 295 Pfam SPARK 38 205 IPR043891 -
Ssu8g0852 295 PANTHER - 1 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0852 Ssu-Chr8 14417484 14418667 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0852 - - gmx:100810917 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0852 8 14417484 14418667 Ssu8g0852 8 14417484 14418667 ECH
Ssu8g0852 8 14417484 14418667 Ssu3g2189 3 71098168 71100086 PCT