Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0850 ATGGTCAACAGTGAGGCTCCAACACGTCTTGAGGGAAAATATGCTGCAATAGTGGTCTGTTGGCTTCTTGGCAATGGATGTCTTTTCTCGTGGAACAGTATGCTGACAATAGAAGATTACTACATTTACTTGTTTCCGAACTACCACCCCTCTAGGGTGCTTACTCTTGTATATCAGCCATTTGCAGTTGGAACACTTGCGATACTGGCGTATAATGAGGCAAAACTCAATACACGATTACGGAATCTGTTTggatatatactttttttcataAGCACTTTGTTGGTGTTAATTTTGAATTTAGCGACATCTAGTAAAGGAGGGCTTGGAAGTTTCATTGGTATATGTGCACTTAGTGGTGCTTTCGGAGTTGCAGATGCTCATGTTCAAGGTGGAATGGTGGGAGACCTGTCCTACATGCAACCAGAATTCATTCAGTCTTTCCTTGCTGGTTTGGCAGCATCCGGTGCATTAACCTCTGCTTTGAGGTTAATTACAAAAGCAGCATTTGAGAATTCTAAGGATGGTCTCCGCAAAGGAGCCATTCTTTTCTTTGCCATTTCAACATTCTTCGAGCTTCTTTGTGTTGTTCTCTATGCATTTATTTTCCCTAAAATACCAATTGTGAAGTACTTCCGTTCAAAGGCAGCATCAGAAGGATCCAAAACTGTATCAGCTGACCTTGCAGCTGGTGGCATCCAGACATTACCTGAAACAgacaAGGAATATGCAAAAGATCCAGAGCGGAAGGGAAACAAGCAATTGTTATTGGAAAATATTGATTATGCACTTGATATGTTCCTAATCTATGTGCTAACACTGTCTATTTTCCCTGGATTCCTATCAGAAGATACTGGATCACATAGTTTGGGCACCTGGTATGCTCTCGTTTTAATTGCTATGTATAATGTGTGGGATCTGATTGGAAGATACATTCCACTCTTGAAATGCTTGAAGTTGGAGTCCCGAAAGTTTATCACAATAGCAATTCTTAGCCGTTTCTTAATTGTTCCAGCATTTTATTTCACTGCAAAGTATGGTGACCAAGGCTGGATGATAATGTTAACGTCCTTCTTGGGGCTATCCAATGGTTACCTCACTGTCTGTGTTCTAACATCTGCACCCAAAGGTTACAAGGGTCCAGAACAAAATGCCTTGGGAAACTTGTTGGTGTTGTTTCTTCTTGGAGGTATTTTTGCAGGGGTGACACTTGACTGGCTGTGGTTAATAGGTAAAAGGTGGTGA 1245 0.4072 MVNSEAPTRLEGKYAAIVVCWLLGNGCLFSWNSMLTIEDYYIYLFPNYHPSRVLTLVYQPFAVGTLAILAYNEAKLNTRLRNLFGYILFFISTLLVLILNLATSSKGGLGSFIGICALSGAFGVADAHVQGGMVGDLSYMQPEFIQSFLAGLAASGALTSALRLITKAAFENSKDGLRKGAILFFAISTFFELLCVVLYAFIFPKIPIVKYFRSKAASEGSKTVSADLAAGGIQTLPETDKEYAKDPERKGNKQLLLENIDYALDMFLIYVLTLSIFPGFLSEDTGSHSLGTWYALVLIAMYNVWDLIGRYIPLLKCLKLESRKFITIAILSRFLIVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVLTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKRW 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0850 414 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 3 413 IPR002259 GO:0005337|GO:0016021|GO:1901642
Ssu8g0850 414 PIRSF ENT 4 412 IPR002259 GO:0005337|GO:0016021|GO:1901642
Ssu8g0850 414 Pfam Nucleoside transporter 124 408 IPR002259 GO:0005337|GO:0016021|GO:1901642
Ssu8g0850 414 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 3 413 IPR030200 -
Ssu8g0850 414 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 150 170 IPR002259 GO:0005337|GO:0016021|GO:1901642
Ssu8g0850 414 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 122 144 IPR002259 GO:0005337|GO:0016021|GO:1901642
Ssu8g0850 414 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 349 365 IPR002259 GO:0005337|GO:0016021|GO:1901642
Ssu8g0850 414 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 386 410 IPR002259 GO:0005337|GO:0016021|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0850 Ssu-Chr8 14401593 14404832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0850 3 413 Organic Solute Cotransporters AT4G05120 70.803 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0850 K15014 - gmx:100798899 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0850 8 14401593 14404832 Ssu8g0850 8 14401593 14404832 ECH
Ssu8g0850 8 14401593 14404832 Ssu3g2190 3 71122933 71125947 PCT