Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0826 ATGTATCAACCATGGAACTTATCGTTACAAATATCAAGACGAGGGatgatacataataaattatggaTCAAATCCGTTGCTTTCCGGGACAagGTGCCTAGTCAAACTGATCATAGAACGAAAAATTTGGAGCAAGTTAAAAGAAAAGGCCAAGAGGCATTGCTAAACTCGACCGATCCAATTAGAACATTGAAGATAATTGACACCATCCAAAGGTTAGGAATTGGGCACCATTTCGAAGAAGAGATCAACGTACAACTTGGAAGGGTAGGGGATTGGGACGTCACTCAAGATCTCTCCGCCACAGCCCTTCAATTTCGCCTGCTGAGGCATAATGGCTGGCCTACTTGTTCCGAtgttttcaagaaatttttggaaaagaGTGGGAATTTCAAGGAATCAATCACCAGTGACATTTGGGGTTTGTTAAGTTTGTATGAGGCATCATATTTAGGTGCAAAAGGTGAAGAAGTATTACAACAAGCAATGGACTTCTCCAAGGCTCATCTGCACCAATCACTCCCACACCTAAGTCCTGAAGTAGGAAAGCTAGTTGCCAGAGCCTTAACACTTCCAAGGAACCTAAGAATGGCTAGGTTAGAAGCTAGAAACTACATGGAAGAATATAGCCAAGCAAGCAGTCAAATACCAGCTCTTTTGGAATTGGCAAAGTTAGACTTTGTCATGGTTCAGTCGATGCACCAAAAAGAATTAGCAGAGATCTCCAGGTGGTGGAAAAAGTTGGGACTTGTTGAGAGACTTGGTTTTGCCAGAGATAGACCAGCAGAGTGCTTCCTATGGACAGTGGGGGTTTTTCCAGAACCATGTTATTCAAATTGTCGCATTGAACTTACAAAAACCATATGCATTTTGCTAGTTATGGATGATATCTTCGACACTTATGGCACATTAGATGAACTTGTTCTTTTTACCAAGGCAATCAAAAGGTGGGATCTTGATGTGATGGAGCAGTTGCCTGAATATATGAAGATATGCTATATGGCATTGTATAACACAACCCATGAAATTGCATATAGAATTCAGAAAGAGCACGGGCAAACCGTTGTTGCTTGCTTGAAAAAAACtTGGATAGACATATTTGAAGCTTTTCTTAAAGAAGCCAAATGGTTCAACAGCGGATACATTCCAGCTTTTAGGGAATATTTGGATAATGGGGTGATTTCTTCAGGATCATACATGGCCTTGGTGCATGCAACTTTCCTCATTGGGGATGGCCTCTCAAAGGAAACCATTTCCGTGATGAAGTCATATCCGAGGCTTTTTTCTTGCTCTGGGGAGATTCTTAGGCTTTGGGACGACTTAGGAACCTCAAGGGAGGAACAAGAAAGAGGAGATAATGCTTGTAGCATACAGTGTCTcatgatagaaaataatatttcagaTGAAAATGTTGCCAGGAAACATATAAGGCAGCTCATAGGGAACTTATGGCTAGAGCTAAACGGCCTTGCTATGACGACAACCGCTCTACCTTTGTCGGTTATGAAGGCTTCTCTTAACATGGCTAGAACTGCTCAGGTTATTTATCAGCATGGAGATGATCAAAGCACATTTACAGTTGATGATTATGTGCAAACATTGCTCTTTACACCCTCTGCCAACTATTAA 1629 0.4015 MYQPWNLSLQISRRGMIHNKLWIKSVAFRDKVPSQTDHRTKNLEQVKRKGQEALLNSTDPIRTLKIIDTIQRLGIGHHFEEEINVQLGRVGDWDVTQDLSATALQFRLLRHNGWPTCSDVFKKFLEKSGNFKESITSDIWGLLSLYEASYLGAKGEEVLQQAMDFSKAHLHQSLPHLSPEVGKLVARALTLPRNLRMARLEARNYMEEYSQASSQIPALLELAKLDFVMVQSMHQKELAEISRWWKKLGLVERLGFARDRPAECFLWTVGVFPEPCYSNCRIELTKTICILLVMDDIFDTYGTLDELVLFTKAIKRWDLDVMEQLPEYMKICYMALYNTTHEIAYRIQKEHGQTVVACLKKTWIDIFEAFLKEAKWFNSGYIPAFREYLDNGVISSGSYMALVHATFLIGDGLSKETISVMKSYPRLFSCSGEILRLWDDLGTSREEQERGDNACSIQCLMIENNISDENVARKHIRQLIGNLWLELNGLAMTTTALPLSVMKASLNMARTAQVIYQHGDDQSTFTVDDYVQTLLFTPSANY 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0826 542 Pfam Terpene synthase family, metal binding domain 220 484 IPR005630 GO:0000287|GO:0010333|GO:0016829
Ssu8g0826 542 SFLD Isoprenoid Synthase Type I 218 538 - -
Ssu8g0826 542 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 35 213 IPR008930 -
Ssu8g0826 542 Gene3D Farnesyl Diphosphate Synthase 30 524 IPR008949 -
Ssu8g0826 542 SUPERFAMILY Terpenoid synthases 217 538 IPR008949 -
Ssu8g0826 542 Pfam Terpene synthase, N-terminal domain 32 189 IPR001906 GO:0010333|GO:0016829
Ssu8g0826 542 CDD Terpene_cyclase_plant_C1 30 538 IPR044814 GO:0010333|GO:0016102
Ssu8g0826 542 Gene3D - 58 215 IPR036965 GO:0010333|GO:0016829
Ssu8g0826 542 PANTHER OS04G0344100 PROTEIN-RELATED 30 538 - -
Ssu8g0826 542 Coils Coil 195 215 - -
Ssu8g0826 542 SFLD Terpene Cyclase Like 1 C Terminal Domain 218 538 IPR034741 -
Ssu8g0826 542 PANTHER R-LINALOOL SYNTHASE PROTEIN-RELATED 30 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0826 Ssu-Chr8 13841864 13845586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0826 - - gmx:100807904 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0826 8 13841864 13845586 Ssu8g0826 8 13841864 13845586 ECH
Ssu8g0826 8 13841864 13845586 Ssu3g2222 3 71946552 71951637 PCT