Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0806 ATGAGAGGATGTGTTTTCGTAGATACCCTCCCAAGTGAAGAAAATGCCAACAATGATGgttctcttcctcctctttgTGCCTCTGAAGACACTTCCCAGCTTCTTTACACTTACAAGCCTGGTGGTCTGCGTTCAGCAATCCGTGTGGCACGTGTTGTGAAAGAGACTGTGGCATTGAACCATCCTGGTGTTAGATGGTATGTGTTTGGGGACGATGACACCATTTTCTTCCCTCAGAATCTGGTCAAAACTCTTTCCAAATATGATCATAGGCTTTGGTACTATGTTGGGTCGTACTCAGAGATTTATGAGGCTTCCCAGATTTTTGGTTTTGGAATGGCTTTTGGTGGAGGTGGTTTTGCCATCAGTTCCTCCCTAGCAGAAGTCCTAGCCAAGATTTTTGATTCATGTATAGAACGGTATTCGCATCTGTATGGAAGTGATGCCAGGGTTTACTCTTGCATAACAGAACTAGGTGTGGGATTGACACATGAACCCGGTTTTCATCAGGTTGATTTGCGGGGAAATATCTTTGGCCTAATGGCTTCACATCCATTAACTCCCTTGTTGTCCCTACATCACCTAGATCACACTGATCCTATTTTTCCTAGCATGACAACTACAAAATCTCTGCAACATTTATTTGAAGCGGTTAATGTTGATTCCGAGAGGATCCTACAACAAACAGTTTGTTATGAAAGGCAATTCTCATGGACAATTTCAGTGTCATGGGGCTATGCTGTTCAAGTATTCCAGAACAATATGCTTCTGCCAGATGTTATAAGAGTGCAAAAAACATTCAAGCAATGGAAGGAAGGAAATGTTTTGGCAggaatatataatttcaatacaAGAGAACTTCACCCTGACCCATGCAAAAGACCCACCATTTTCTATCTAGATGAAGTGTCTTCCGGCAAAGATGGCACCATAAGCAGTCACaggaaatattttcaaaattgctCATACAAGGCATCAATGAAGAAGTTGGAAGTGATCAAAGTGGTTACAAATAAGTTATACCTTGACAACGATCAGTTGCAGACTCCAAGAAGGCACTGTTGTGATGTGTTGCCCACTAACGATGGTGACTTGATGGAAATTGCAATCAGAGAGTGTAAATCTGAAGAACTGATTTACATGCACTGA 1149 0.4012 MRGCVFVDTLPSEENANNDGSLPPLCASEDTSQLLYTYKPGGLRSAIRVARVVKETVALNHPGVRWYVFGDDDTIFFPQNLVKTLSKYDHRLWYYVGSYSEIYEASQIFGFGMAFGGGGFAISSSLAEVLAKIFDSCIERYSHLYGSDARVYSCITELGVGLTHEPGFHQVDLRGNIFGLMASHPLTPLLSLHHLDHTDPIFPSMTTTKSLQHLFEAVNVDSERILQQTVCYERQFSWTISVSWGYAVQVFQNNMLLPDVIRVQKTFKQWKEGNVLAGIYNFNTRELHPDPCKRPTIFYLDEVSSGKDGTISSHRKYFQNCSYKASMKKLEVIKVVTNKLYLDNDQLQTPRRHCCDVLPTNDGDLMEIAIRECKSEELIYMH 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0806 382 PANTHER FRINGE-RELATED 1 380 - -
Ssu8g0806 382 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 1 380 - -
Ssu8g0806 382 Gene3D - 24 202 - -
Ssu8g0806 382 Pfam Protein of unknown function, DUF604 108 355 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0806 Ssu-Chr8 13273944 13275472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0806 2 382 Glycosyltransferase AT4G15240 54.427 3.68e-147 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0806 - - gmx:100779943 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0806 8 13273944 13275472 Ssu8g0806 8 13273944 13275472 ECH
Ssu3g2227 3 72017349 72019688 Ssu8g0806 8 13273944 13275472 PCT