Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0793 ATGGAGCATTCTCTGAATCCTTCTATGGGAAAAGCAGGGTCAGGCAGTGCCACTGAGGAAAGCGGGTGGACTTCTTACTTCGAAGATTTCTCTATGGGCATGGAGCAGCAAAGTTATTGTTCCAGTTTGGGTGGCTCCTCTTTGGTCTCAGATGCTGCTTCTTGTGCTGCATGGAAACTCTCACACCACAATCACCTTGTTTCCTACTCTTCTCATGTTAGAGTTAGGGACCCATCAAATGTCTCTAAGAAGAAACTTTGTTTCAAGAAAACAAGAACCCAACAGATATCAAATGATGACCCCTTGGAGGACACTGCTAGCTCCCCCGTCAATAGTCCCAAGGTAGGAGACTTGAAAGTTTCCAGCAAGATTGATGCTCAGCTAAATGGTTCTACTTCTAGGGGTAGGGAGTTTCAATCAGAGAATTATCCAAAGCTACAGACTCATGAGTGTgacataaattttaatggaaaCAATATTGAGTGCAACACAGACTTGAAGAAAAAGGGTCTCTGCTTGGTTCCTTTGTCCATGTTGGTTAATTATTATGGGTGA 555 0.4252 MEHSLNPSMGKAGSGSATEESGWTSYFEDFSMGMEQQSYCSSLGGSSLVSDAASCAAWKLSHHNHLVSYSSHVRVRDPSNVSKKKLCFKKTRTQQISNDDPLEDTASSPVNSPKVGDLKVSSKIDAQLNGSTSRGREFQSENYPKLQTHECDINFNGNNIECNTDLKKKGLCLVPLSMLVNYYG 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0793 184 MobiDBLite consensus disorder prediction 97 116 - -
Ssu8g0793 184 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 1 183 - -
Ssu8g0793 184 MobiDBLite consensus disorder prediction 1 20 - -
Ssu8g0793 184 MobiDBLite consensus disorder prediction 97 115 - -
Ssu8g0793 184 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 1 183 IPR039280 GO:0010089
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0793 Ssu-Chr8 13066196 13066962 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0793 - - gmx:100306218 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0793 8 13066196 13066962 Ssu3g2240 3 72258584 72259414 PCT