Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2240 ATGGATCATTCTCTGAATTGTTCATCTAGAGGCGGAGCAGTACCTGCCACCAAAAACCCAAATGGTTCTGATGATGAAAGTGGATGGACATCTTACTTGGAAGATTTCTCTAAAGGCATAGAGCCCAGTTACTGTTCCAGTTTGGATGGCTCCTCTTTGCTCTCAGATGCTGCTTCTTGTGCTGCATGGAaattttctcatcaaaatcATCTGGTCTCTTGCTCCTCATTTAAGGGTAGTAGTGCACCAAATCTACCCAAAAAACTGAGTTTTAAGAAAGCAAGAGCCAAACAGATATCAGAGGATGACCCTTTAGAAGACACTGCCAGCTCTCCAGTCAATAGCCCCAAGGTGAGAGACTTGACTCCAACTGAAATCAGTTCTAGGAAGGTTGATGATCAATTAGAAGGTTCTATGGGGTATAAGGGATTCACATCATCAGAGCATTATTCAGATTTGAAGACCGATGATAATaagcatgaattaaattttagtggAAAGAATATTGACTGCGCAGACTTGAAGAAAAGAGGGCTATGCCTGGTTCCTTTGTCCTTGTTGGTTAATTATTTGGGGTGA 579 0.3972 MDHSLNCSSRGGAVPATKNPNGSDDESGWTSYLEDFSKGIEPSYCSSLDGSSLLSDAASCAAWKFSHQNHLVSCSSFKGSSAPNLPKKLSFKKARAKQISEDDPLEDTASSPVNSPKVRDLTPTEISSRKVDDQLEGSMGYKGFTSSEHYSDLKTDDNKHELNFSGKNIDCADLKKRGLCLVPLSLLVNYLG 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2240 192 MobiDBLite consensus disorder prediction 1 30 - -
Ssu3g2240 192 MobiDBLite consensus disorder prediction 105 122 - -
Ssu3g2240 192 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 1 192 - -
Ssu3g2240 192 MobiDBLite consensus disorder prediction 93 129 - -
Ssu3g2240 192 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 1 192 IPR039280 GO:0010089
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2240 Ssu-Chr3 72258584 72259414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2240 - - gmx:100804712 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2240 3 72258584 72259414 Ssu3g2240 3 72258584 72259414 ECH
Ssu8g0793 8 13066196 13066962 Ssu3g2240 3 72258584 72259414 PCT