Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0767 ATGGCTACCACTGCATCATCCCCTTTCAAGAAAATTCAGATTCAAAGGGATGACAGTACATTTGATGCGTATGTGGTTGGAAAAGAGGATGCTCCTGGAATTGTTGTGCTTCAGGAGTGGTGGGGTGTGGATTACGAAATTAAGAATCATGCTGTGAAGATTTCTCAGCTTGGCACGGGGTTTAAAGCTCTTATCCCAGATCTGTACAGAGGAAAGGTTGGTCTGGATGTTGCTGAAGCTCAGCATTTGATGGATGGTCTTGATTGGCAAGGTGCTGTGAAGGATATTACTGCTTCGGTTAACTGGCTTAAAGCCAATGGTTCAAAGAAGGCTGGTGTAACTGGATTTTGTATGGGAGGTGCTCTCGCTATTGCCAGTTCTGTCTTGATTCCAGAGGTTGACGCTGTTGTATCATTCTATGGAGTTCCTTCTTCTCAGCTTGCAGATCCTGCCCAAGCCAAGGCTCCTGTTCAGGCTCACTTTGGAGAGCTGGACAATTTTGTTGGCTTTTCAGATGTCACAGCAGCCAAGGCCTTGGAGGAGAAGCTGAAGGCATCCGGAGTTCCACACGAGGTACATCTCTATCCTGGCAATGCACATGCTTTCATGAACAGGTCTCCAGATGGAATTCAGAGGAGGAAGAACATGGGAATGCCTGATGAAGATGAACCTGCAGTTCAGCTTGCTTGGTCTCGCTTCCAGACATGGATGACACGTTACTTGTCTAGTTAG 732 0.4686 MATTASSPFKKIQIQRDDSTFDAYVVGKEDAPGIVVLQEWWGVDYEIKNHAVKISQLGTGFKALIPDLYRGKVGLDVAEAQHLMDGLDWQGAVKDITASVNWLKANGSKKAGVTGFCMGGALAIASSVLIPEVDAVVSFYGVPSSQLADPAQAKAPVQAHFGELDNFVGFSDVTAAKALEEKLKASGVPHEVHLYPGNAHAFMNRSPDGIQRRKNMGMPDEDEPAVQLAWSRFQTWMTRYLSS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0767 243 PANTHER CARBOXYMETHYLENEBUTENOLIDASE-RELATED 4 241 - -
Ssu8g0767 243 SUPERFAMILY alpha/beta-Hydrolases 9 241 IPR029058 -
Ssu8g0767 243 Pfam Dienelactone hydrolase family 21 240 IPR002925 GO:0016787
Ssu8g0767 243 PANTHER BNAC04G12290D PROTEIN 4 241 - -
Ssu8g0767 243 Gene3D alpha/beta hydrolase 4 241 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0767 Ssu-Chr8 12554961 12558183 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0767 K01061 - gmx:100790249 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0767 8 12554961 12558183 Ssu8g0767 8 12554961 12558183 ECH
Ssu8g0767 8 12554961 12558183 Ssu3g2270 3 72802613 72807143 PCT