Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2270 atGTTGCACGTTGCTCCCAGATTCTTCACCAGGGTCCCTCTCCGGACCATTTCACCCTTTGCATGTCGCTTCTCAGTCCGTTCCATCGCCGACTCTGCTCCTTTCAACAAAATCCGCATTCAAAGGGATGACACTGCATTtgatgcatatgttgttggcaaAAACAACGCTCCAGGAATCGTTGTGCTTCAGGAGTGGTGGGGTGTCgactttgaaattaaaaatcatgctgCGATGATTTCTCAACTTGGTCGTGGATTCAAAGCTCTTATTCCAGATCTGTATAGAGGAAAGGTTGGTCTGGATGTTGCAGAAGCACAGCATTTGTTAGATGGTCTTGATTGGCAAGGTGCTGTGAAAGATATCCGTGCTTCAGTTAACTGGCTTAAGGCAAATGGTTCAAAGAAGGCTGGTGTTACTGGATTTTGTATGGGGGGTGCTCTCGCTATTGCAAGCTCGGTCTTGGTTCCAGATATTGATGCTGTTGTAGCTTTCTATGGAGTTCCTTCTTCTGAGCTTGCAGACCCTGCCCAAGCTAAGGCGGCTGTTCAGGCCCACTTTGGAGAGCTGGATAATTTTGTTGGCTTCGCAGATGTTACGGCTGCCAAGGCCTTGGAGGAGAAGCTGAAGGCATCTGGTGTTCCACATGAGGTACACATATATCCTGGCAATGGACATGCATTCATGAACAGGTCTCCAGAAGGAATCAAGAGGAGGAAGAGCATGGGAATGCCTGACGAAGACGAAGCCGCAGTTCAGCTGGCCTGGTCTCGCTTCCAGTCATGGATGACACGTTACTTATCTGGCTAA 810 0.4642 MLHVAPRFFTRVPLRTISPFACRFSVRSIADSAPFNKIRIQRDDTAFDAYVVGKNNAPGIVVLQEWWGVDFEIKNHAAMISQLGRGFKALIPDLYRGKVGLDVAEAQHLLDGLDWQGAVKDIRASVNWLKANGSKKAGVTGFCMGGALAIASSVLVPDIDAVVAFYGVPSSELADPAQAKAAVQAHFGELDNFVGFADVTAAKALEEKLKASGVPHEVHIYPGNGHAFMNRSPEGIKRRKSMGMPDEDEAAVQLAWSRFQSWMTRYLSG 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2270 269 Pfam Dienelactone hydrolase family 47 266 IPR002925 GO:0016787
Ssu3g2270 269 Gene3D alpha/beta hydrolase 30 267 IPR029058 -
Ssu3g2270 269 PANTHER CARBOXYMETHYLENEBUTENOLIDASE-RELATED 18 267 - -
Ssu3g2270 269 SUPERFAMILY alpha/beta-Hydrolases 37 267 IPR029058 -
Ssu3g2270 269 PANTHER BNAC04G12290D PROTEIN 18 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2270 Ssu-Chr3 72802613 72807143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2270 K01061 - gmx:100799250 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2270 3 72802613 72807143 Ssu3g2270 3 72802613 72807143 ECH
Ssu8g0767 8 12554961 12558183 Ssu3g2270 3 72802613 72807143 PCT