Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0764 ATGGCCAACCAAGGACAAGATCTCCCTCTCTATGAAAAAATTTGGCTCAAGCGCACATTTCAAAGAGTGGTAGACACCTTGATTTTACTCCTCCTCCTCTTGCTTCTTAGCTACCGTGTTTTCTCATCCAACGGCTTCACTTTCCCATGGTTCCTTGCTTTGTTATGTGAATCCTGGTTCACCTTCACTTGGATTGTGATTCTCAACGCCAAGTGGAGTCCTGCAGTGACCATAACCCACCCAGATCGTCTCCTGCAAAGGGTATCTGAGCTTCCACCAGTGGACTTGCTTGTGACAACAGCAGACCCTGTACTTGAACCCCCCATCATCACAGTCAACACTGTGTTGTCTCTTCTAGCGCTTGATTATCCAGCTAACAAGTTAGCTTGCTATGTTTCTGATGATGGTTGTTCCCCTCTTACTCTCTATGCCCTTGTGGAAGCCTCCAAATTCGCTAAGCTTTGGGTACCTTTCTGTAAGAAGTACAACGTGCAGGTCAGAGCGCCCTTCAGATACTTCTATGATGTTGCCACTAACGAAAGTGAAGAGCAACTTGAATTCAAACAAGAATGGTTACGAATGAAGGAAATGTATGTCAATCTTAGCCAAAAAATTGAAGAGGTGACACGCAAAACAATTCCATTCCAACTTGATGGAGAATTTGCAGTTTTCTCAAATACAGACCAAAGAAATCATCCAAGCATAATTAAGGTTATATTGGAGAACAAGGATGGTCTTTTAGATGGGTTGCCTCACTTAATCTACATTTCCAGAGAGAAGAGGCCACAGTATCATCCTAATTACAAAGCCGGAGCAATGAATGTGTTGACAAGGGTCTCTGGGTTGAAGACCAATGCTCCCTTCATGTTGAACGTAGACTGTGACATGGTTGTGAACAATCCGAAGATTGTTCTGCACGCTATGTGCATTTTGATGGATTcagaaaagggaaaagaagtTGCTTTCGTTCAATGTTTCCAACAATTCTACGATGGAATAAAAGATGACCCTTTCGGAAATCAGTGGGTGGCTGCATTTGAGTACGTAATACGGGGCATGGCAGGACTTCAAGGACCTTTCTATGCGGGAACAAACACCTTCCATAGAAGAAATGCTATTTACGGTCTTTATCCTCATGAAATTGAAAGCGGGAATAAAGGAAAATTAGTAGAGAAGATATTAACACAACAATTTGGAAGTTCAAAGGAGTTTATCAAATCAGCAGCTCATGCTTTGGGAGGGAGTGCATATTCTGCTAATGATATTAGTCCTTCCAACTTTCTTGAGGCAGCAACCCAAGTCGCGAACTGTGAATATGAATATGGCACTAGTTGGGGTAAACAGATGGGCTGGTTGTATGGATCAATCGCAGAAGATGTACCAACCGGGTTgaatattcaaagaaaaggtTGGAGATCAGAGTGTTGTACCCCAGATCCCACTGCCTTCACAGGATGTGCTCCTGGAGGATTACTCTCTACAATGATACAACAAAAAAGATGGGCCTCAGGCCTCACTGTAGCCTTTTTTGGAAAGCACTCTCCTGTTATGGGCATGCTCTTTGGTAAGGTCCAGTTCAGGGCAGGCTTGTCTGTTTTTTGGCTTGCCAACTGGGGCTTGCGGGGTGTCTTCCTAGTTTGCTATGTTGCTCTACTTGCATACTGCATGATTAACAACACCAATATCTTTCCTAAGGGACTTGGGCTTTGGATTCCAATTGCTCTTTTTGTGATTTACAAAGTGTATACTCTTTTTGAGTACCTTACAATTGGGTTGTCAATTCGACATTGGTGGAACAATCAGAGAATGAGCATAATAACAACCACAACTGCATGGTTTGTTGGATTTTTGAGTGCTATGCTTAAGCTATCAGGGATATCCGACACTGTGTTTGAAATAACAGAGAAGGAACACCCAACATCTGGTGGTGATGGAAACAATGCAGATGCTGGAAGGTTCACGTTCGACGATTCCCCAGTTTTTGTGGTGGGCACGACCATTTTGCTGGTTCATTTGACAGCCATGTTGATCAATTTTTGGGGGTTGCAGCCAACTCATAGTGGGAATGGGTGTGGACTAGGGGAGTTCATCTGTAGTACGTATCTGGTGGTGTGTTACTGGCCATATTTGAAAGGGTTGTTTGGCAGAGGAAAATACGGGATTCCCTTGTCCACCATGTGCAAGTCTGCAGTGTTTGCATTTGTCTTTGTGCACTTTTGTAGAAGTAACGTTAGCAGTTGA 2241 0.4284 MANQGQDLPLYEKIWLKRTFQRVVDTLILLLLLLLLSYRVFSSNGFTFPWFLALLCESWFTFTWIVILNAKWSPAVTITHPDRLLQRVSELPPVDLLVTTADPVLEPPIITVNTVLSLLALDYPANKLACYVSDDGCSPLTLYALVEASKFAKLWVPFCKKYNVQVRAPFRYFYDVATNESEEQLEFKQEWLRMKEMYVNLSQKIEEVTRKTIPFQLDGEFAVFSNTDQRNHPSIIKVILENKDGLLDGLPHLIYISREKRPQYHPNYKAGAMNVLTRVSGLKTNAPFMLNVDCDMVVNNPKIVLHAMCILMDSEKGKEVAFVQCFQQFYDGIKDDPFGNQWVAAFEYVIRGMAGLQGPFYAGTNTFHRRNAIYGLYPHEIESGNKGKLVEKILTQQFGSSKEFIKSAAHALGGSAYSANDISPSNFLEAATQVANCEYEYGTSWGKQMGWLYGSIAEDVPTGLNIQRKGWRSECCTPDPTAFTGCAPGGLLSTMIQQKRWASGLTVAFFGKHSPVMGMLFGKVQFRAGLSVFWLANWGLRGVFLVCYVALLAYCMINNTNIFPKGLGLWIPIALFVIYKVYTLFEYLTIGLSIRHWWNNQRMSIITTTTAWFVGFLSAMLKLSGISDTVFEITEKEHPTSGGDGNNADAGRFTFDDSPVFVVGTTILLVHLTAMLINFWGLQPTHSGNGCGLGEFICSTYLVVCYWPYLKGLFGRGKYGIPLSTMCKSAVFAFVFVHFCRSNVSS 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0764 746 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 2 745 - -
Ssu8g0764 746 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 2 745 - -
Ssu8g0764 746 SUPERFAMILY Nucleotide-diphospho-sugar transferases 108 548 IPR029044 -
Ssu8g0764 746 Pfam Cellulose synthase 94 383 IPR005150 GO:0016020|GO:0016760|GO:0030244
Ssu8g0764 746 Pfam Cellulose synthase 387 735 IPR005150 GO:0016020|GO:0016760|GO:0030244
Ssu8g0764 746 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 220 383 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0764 Ssu-Chr8 12519621 12523743 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0764 1 737 Glycosyltransferase AT2G32540 48.489 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0764 - - gmx:100795671 1374.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0764 8 12519621 12523743 Ssu8g0764 8 12519621 12523743 ECH
Ssu8g0764 8 12519621 12523743 Ssu3g2271 3 72811413 72821645 PCT