Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0763 ATGGATTCCTTGACTTTGCTCCTCCTCCTCATGCTTCTTGGTTACCGTATTTTCTCTCGTAACAACCACACCTTCCCCTGCCTCGTTGCCTTCATATGCGAGTCATGGTTCACTTTCACTTGGATTCTCATCATCAGCACCAAATGGAATCCTGCACACACCAAAACCTACATAGACCGTCTCTTGCTTCGAGTACCTGAGGCTGAGCTTCCACCAGTGGACCTATTTGTGACAACAGCAGACCCAGTGCTTGAGCCACCTATCATCACAATCAACACTGTGTTGTCTCTGCTGGCGCTTGATTATCCTTCTAACAAGCTAGCTTGCTATGTTTCTGATGATGGATGCTCCCCTCTTACCTTCTACGCCCTTGTGGAAGCCTCTAAATTTGCCAAGCTTTGGGTACCTTTCTGTAAGAAGTACAACGTGCAGGTCAGAGCACCCTTCAGATACTTCTCTAATAACACCAGCGCTAACAACAGTGAAGACTCACCGGAATTTATTCAAGAACTGTTAAGGATGAAGGACAAGTACGAGCGCCTTAGTCGTAAAATTCTGAATGCAGAACAAAATTCGATTTCGCTTCTTGGACAGTCTACGATTTTCTCAAATACACACCCAAGAAATCATCCAACCATAATTAAGGTAATATGGGAAAACAAAGAAGGTCTTTCAGATCAGTTGCCACACTTAATCTACGTATCTAGAGAAAAGAAGCCGAAGCATCCACATCATTATAAAGCTGGTGCTATGAACGTGTTGACAAGAGTCTCTGGACTGATGACAAATGCCCCCTACATCCTGAACGTAGATTGTGACATGTATGTGAATAATCCAAAGATTGTTCTACACGCCCTGTGCATTTTATTAGATTCAAAGGGAGAAAAAGAAGTTGCATTTGCCCAGTGTATCCAGCAATTCTATGATGGATTAAAGGATGATCCTTTCGGAAATCAGCTTGTGGCTCTGTTTCTGTACTTAGGGGGTGGAGTAGCAGGGCTCCAAGGGATATTTTACGCAGGAACAAATTGCCTGcacagaagaaaaataatttacgGCCTTTCTCCTGATCATGGCATTCAAAATGGAAAGAAGGATCATGCCATCACCAGTGGGAAATACTCGGAAAAGAAAACAGTATTTGGAAAGGGGTTTGTGGAATCAGCCACTCATGCTTTGGAAGGGAAGACAGTTACTCCCAATAATAACCTTTGCAACTCTCTTGAGGCAGCGAGCGAAGTTGCTAGTTGTGAATATGAATACGGCACTGCCTGGGGTAAACAGGTGGGTTGGATCTATGGATCAACGGCAGAAGATGTACTTACTGGGCTGAAAATCCACACAAAAGGTTGGAGGTCCGAAATATGTTTACCAAATCTTATAGCTTTTATGGGTTGTTCACCTCAAGATATCATAATTGTGATGGTTCAACAAAGGAGATGGGCCTCAGGGTTGTTTGATATCCTCCTAAGTAAGCATTGTCCAATTTTTGGAACCCTATTTGGTAAGCTCCAGTTCAGACAGTGCTTGGGGTATCTTTGGATCACTTGTTGGCCCTTACGATCTGTTCCCGAAATATGCTATGCTACTCTCCCTGCTTATTGCATCATTACCAACTCCAGTTTCTTGCTCAAGGAACTTGGACAATGGATCCCTACTACTTTGCTTGTGATTTACATCATATCTACTCTTCTAGAGTATTTGAAAACAGGGTTGTCAATTCGAACATGGTGGAACAATCAGCGAATGGCAAGGATAACAACCATGAATGCTTGGTTTTTTGGATTTTTGGCCATCCTACTTAAGCGATTAAGGATATCTGACACTGTCTTTGAAATAACGAGGAAAACCCAACCATTTTCCAACAAGTGTGCTAATGAAAACGCTGGTAGATTCATTTTTAACAAGTCTCCAGTTTTTTTACCTGGCACAACTATTTTGCTTATTCAATTCATGGCATTGGTTACCAAGTGGTTGGGATGGCAACCACCTGTTAGAAATGGGCATGGATCTGGTGTGGGGGAAGTATTGTGTAGTTTATATTTGGTTATATGCTACTGGCCATTTTTTAAAGGGTTGTTCAAGAAAGGAAAGTATGGTATTCCCTTGTCCACGATATGCAAGTCAGTGGTGTTGGCTTTCCTTTTTGTGCACTTATGCAAACTTAGCATTAAGGATTGA 2181 0.42 MDSLTLLLLLMLLGYRIFSRNNHTFPCLVAFICESWFTFTWILIISTKWNPAHTKTYIDRLLLRVPEAELPPVDLFVTTADPVLEPPIITINTVLSLLALDYPSNKLACYVSDDGCSPLTFYALVEASKFAKLWVPFCKKYNVQVRAPFRYFSNNTSANNSEDSPEFIQELLRMKDKYERLSRKILNAEQNSISLLGQSTIFSNTHPRNHPTIIKVIWENKEGLSDQLPHLIYVSREKKPKHPHHYKAGAMNVLTRVSGLMTNAPYILNVDCDMYVNNPKIVLHALCILLDSKGEKEVAFAQCIQQFYDGLKDDPFGNQLVALFLYLGGGVAGLQGIFYAGTNCLHRRKIIYGLSPDHGIQNGKKDHAITSGKYSEKKTVFGKGFVESATHALEGKTVTPNNNLCNSLEAASEVASCEYEYGTAWGKQVGWIYGSTAEDVLTGLKIHTKGWRSEICLPNLIAFMGCSPQDIIIVMVQQRRWASGLFDILLSKHCPIFGTLFGKLQFRQCLGYLWITCWPLRSVPEICYATLPAYCIITNSSFLLKELGQWIPTTLLVIYIISTLLEYLKTGLSIRTWWNNQRMARITTMNAWFFGFLAILLKRLRISDTVFEITRKTQPFSNKCANENAGRFIFNKSPVFLPGTTILLIQFMALVTKWLGWQPPVRNGHGSGVGEVLCSLYLVICYWPFFKGLFKKGKYGIPLSTICKSVVLAFLFVHLCKLSIKD 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0763 726 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 2 724 - -
Ssu8g0763 726 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 2 724 - -
Ssu8g0763 726 SUPERFAMILY Nucleotide-diphospho-sugar transferases 87 493 IPR029044 -
Ssu8g0763 726 Coils Coil 171 191 - -
Ssu8g0763 726 Pfam Cellulose synthase 73 367 IPR005150 GO:0016020|GO:0016760|GO:0030244
Ssu8g0763 726 Pfam Cellulose synthase 375 717 IPR005150 GO:0016020|GO:0016760|GO:0030244
Ssu8g0763 726 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 203 360 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0763 Ssu-Chr8 12463660 12484224 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0763 28 719 Glycosyltransferase AT2G32540 49.860 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0763 - - gmx:100780817 1262.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0763 8 12463660 12484224 Ssu8g0763 8 12463660 12484224 ECH
Ssu8g0763 8 12463660 12484224 Ssu3g2272 3 72836616 72843973 PCT