Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0762 atgggttTGAGTTGCGGTGGCGTTGTGGTGAGGTTTGGTTTGTGGGTGGTGGCGCTGTGCATTGCAGGGTACATAGTGGCCCCCCCTCTCTACTGGCACTTCATTGGAGTCGTCAAACATTCTTCTTCTGCTTGTGCTCCTTGCGTCTGCGATTGCTCTTCCCAGCCCCTCATTTCTATTCCCCAAGGGCTTAGCAACTCTTCATTTGAAGATTGTGCAAAGCACAATCCAAAGGTGGATGGAGACACCGAAAAGAATGTAGCGGAGTTATTGTCAGAAGAACTAAATCTACGGGAAACTGAAGCTTTGAAAAATCAGCATCGTGCTAACATGGCTCTGCTGGAGTCTAAGAAGATTGCATCTCAGTATCAAAAAGAAGCAGACAAGTGTAATTCAGGTATGGAGACTTGCGAGGAAGCCAGGGAAAAGGCTGAGATGGCATTAGTGGCTCAGAAGAAGCTGACTGCCTTGTGGGAACTGAGAGCTCGTCAGAAAGGATGGAAAGAAGGTGTTGCCAAATCTAATACTCGGTCTCAAGGGAAAGTACAGAATGCTTAG 558 0.4695 MGLSCGGVVVRFGLWVVALCIAGYIVAPPLYWHFIGVVKHSSSACAPCVCDCSSQPLISIPQGLSNSSFEDCAKHNPKVDGDTEKNVAELLSEELNLRETEALKNQHRANMALLESKKIASQYQKEADKCNSGMETCEEAREKAEMALVAQKKLTALWELRARQKGWKEGVAKSNTRSQGKVQNA 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0762 185 Pfam Protein of unknown function (DUF1068) 9 170 IPR010471 -
Ssu8g0762 185 PANTHER EXPRESSED PROTEIN 4 174 - -
Ssu8g0762 185 Coils Coil 97 117 - -
Ssu8g0762 185 PANTHER - 4 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0762 Ssu-Chr8 12446458 12448976 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0762 - - gmx:100306449 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0762 8 12446458 12448976 Ssu3g2273 3 72883464 72885882 PCT