Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2273 ATGGCCATGAACCAATCAAGGGCTGTGTTGTTGAGGGTGAGTTTGACGGTGGTGGCGCTCTGCATAGCAGGGTACATAGTGGGTCCCCCTCTCTACTGGCATTTCGTTGAAGGCTTGGCTGGAGTGAAGCACTCTTCTTCTGCTTGTGCCCCCTGCATCTGCGATTGCTCTTCACAACCCCTCCTTACCATTCCCCAAGGGCTGAGCAACACTTCCTTTGGAGATTGTGCAAAGCCTGATCCAGAAGTGAGTGGAGATACTGAAAAGAATTTTGCAGAGCTGTTGACAGAAGAACTCAAGCTACGGGAGAATCAAGCCGTGGAAAATCAGCAACATGCTGACATGGCACTGCTTGAGGCAAAGAAGATTGCATCTCAGTATCAGAAGGAAGCAGACAAGTGTAATTCAGGGATGGAAACGTGCGAGGAGGCTAGGGAGAAGGCTGAGTTGGCATTAGTCGCGCAGAAGAAGCTAACTGCATTGTGGGAACTTAGAGCTCGTCAGAAAGGGTGGAAGGAAGGGCTTGCCAAATCTCATACACACTCTCAAGGGAAAGTACAGAGTGCTTAG 570 0.5 MAMNQSRAVLLRVSLTVVALCIAGYIVGPPLYWHFVEGLAGVKHSSSACAPCICDCSSQPLLTIPQGLSNTSFGDCAKPDPEVSGDTEKNFAELLTEELKLRENQAVENQQHADMALLEAKKIASQYQKEADKCNSGMETCEEAREKAELALVAQKKLTALWELRARQKGWKEGLAKSHTHSQGKVQSA 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2273 189 PANTHER EXPRESSED PROTEIN 8 178 - -
Ssu3g2273 189 PANTHER - 8 178 - -
Ssu3g2273 189 Pfam Protein of unknown function (DUF1068) 10 174 IPR010471 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2273 Ssu-Chr3 72883464 72885882 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2273 - - gmx:100527412 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2273 3 72883464 72885882 Ssu3g2273 3 72883464 72885882 ECH
Ssu8g0762 8 12446458 12448976 Ssu3g2273 3 72883464 72885882 PCT