Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0759 ATGATGCCATTTCTGTTACTATACAATCGTATGAAGCCGGAGAAGGACCTGAATCACAACCTTACCGAGTCGCTTACATTTTCAATGGCGGAAACTTTCAGCCCGAACAAGAGGGGTCCGATATCCGCTCGTATCCAATCTCCGAAGAGCACTTTCTTCGTGGGCTCCAACGACGACCAGCTTGAACGGGCCCAGGCCCGCGCAGCCCGGGCCGCCGCCATCCGCCGCAAGTCCCTCGCCGCTAACGTCCACTCCCAACCCGCCAATTCTCATCCCTATCTAAACAAGCACCAGATTCTCGACTTGTTGCACAACTGCATAAAGCTTGCCTCCGAAAATAAAATTAATCAGAAAAACACATGGGAGTTGGATTTGATTGATCACCTCACTGAAATTATTAGGGCTGAAGAAGGGAATTACGTGGAGACTAATTTTCAAATAGCAAGTTGTACTCTTGAAGCTGGAGTCAAAATTTACTCCTTAAGGGTGGATTCGGTGCATTCTGAGGCATACAAAGTCCTTGCTAGAATGAATAGAGCAGGCCAGGAAACTGAGGAAGGTTACAATAATTACAATACTCTAGGAAGTGTTAATGCTGAGGGTGGACAATCCAGCAGGAAACAAATTGACAAAAAGTTGTCGCCTTTGTCAACATTGGAATCATCTTTTGAGGTTCTTAATGTAAAGAAGTTTGACGTTGCATTTGCTGTGGATCCACTCTATCGCCAGACATCAGCCCAATTTGATGAAGGTGGAGCCAAAGACCTTTTGATGAATAATCTTGGTGTATATGGTAGATGTAGGGTGCTCTTTGATTCACTAGAAGTGCCAGGGAAGTGCATAACCAGTCAAAATGAACATGATATTTCAGATGCAATTGATCTTTCTTTCGCCAGAGATTGTGTTGAACAGATGATATTGAACATGCATATGAAGGATGAAATCTCTCCAACTCTGAGGGTGATAGTAAatcaatttgatgaaaataatagaaGGCCTTCTGATTTTCAAATTTCTGGCCAGAAATCAGCTGAAGAGTTTGATGCAGCTATTGATTGTGAACTTGCcactgaaaaagaaaatgagaactgCCCATCCTGGAACGATGATCATGATAGCCAAACATTTGTTGCTGAAGGGGGTTCTGATGATGCAGACCCAAGTTTTCCAAGTTACCATCAGGAAAAAGAACCTTTTCATTCCCAAGACCCTGATATGGACGACATATTTGAAAATGTTGAcgagtatttattttttagtctgGGTTttgggtcaaagaaaaatgcatggGCAGGCCCTGATCATTGGAAGTATCGAAAAGCTGAAGGCTCAGAGTCAGATGTTCATCGTACTTCTGAGGATGAGTTGACCCAGAAAACCAGGCAGCCAAGGACTAAGAGACAGGTTGAAGTTGATTTAGATTTCATCAATTTTCTTGAGATAAAAATACCAGATATCTTTTCTCCTCCCAGCAATCCCAAATCATTACTGCTCCCTGAAAATAGACCACCTTGCGTTACAAAACTTCCAGAGGACTGCCACTATGAACCTGAGGATCTTGCCAAATTATTTCTTTTGCCCTATGTAAAGTGTATTGGGAGGAGGTCGAGAAAGTTCTCAGGTGCATTTGCGGATGTATCAGGAGAACAATACAATAACTATGTATCATTCCCTTCCTGGGATAATAGAAGTGTTTGTGATGGTGGTGTTACTGATGTACATAGTGACATGGATGACTCTAGCACACTTATTTCTCAGCCTCGTCAGATCAATAAAATTGAAGTCCAGTATGACAAAATATCCAAACAAGTCAATGTTCAGGATCTGAAAATAACACTTTGGGACCATATTCAAGAATCTATTCAACTTGCTTTTCAGGTATGCTAA 1887 0.4049 MMPFLLLYNRMKPEKDLNHNLTESLTFSMAETFSPNKRGPISARIQSPKSTFFVGSNDDQLERAQARAARAAAIRRKSLAANVHSQPANSHPYLNKHQILDLLHNCIKLASENKINQKNTWELDLIDHLTEIIRAEEGNYVETNFQIASCTLEAGVKIYSLRVDSVHSEAYKVLARMNRAGQETEEGYNNYNTLGSVNAEGGQSSRKQIDKKLSPLSTLESSFEVLNVKKFDVAFAVDPLYRQTSAQFDEGGAKDLLMNNLGVYGRCRVLFDSLEVPGKCITSQNEHDISDAIDLSFARDCVEQMILNMHMKDEISPTLRVIVNQFDENNRRPSDFQISGQKSAEEFDAAIDCELATEKENENCPSWNDDHDSQTFVAEGGSDDADPSFPSYHQEKEPFHSQDPDMDDIFENVDEYLFFSLGFGSKKNAWAGPDHWKYRKAEGSESDVHRTSEDELTQKTRQPRTKRQVEVDLDFINFLEIKIPDIFSPPSNPKSLLLPENRPPCVTKLPEDCHYEPEDLAKLFLLPYVKCIGRRSRKFSGAFADVSGEQYNNYVSFPSWDNRSVCDGGVTDVHSDMDDSSTLISQPRQINKIEVQYDKISKQVNVQDLKITLWDHIQESIQLAFQVC 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0759 628 PANTHER CONDENSIN COMPLEX SUBUNIT 2 33 626 IPR022816 GO:0000796|GO:0007076
Ssu8g0759 628 MobiDBLite consensus disorder prediction 441 464 - -
Ssu8g0759 628 PIRSF Condensin_H 28 300 IPR022816 GO:0000796|GO:0007076
Ssu8g0759 628 PIRSF Condensin_H 569 626 IPR022816 GO:0000796|GO:0007076
Ssu8g0759 628 PIRSF Condensin_H 292 580 IPR022816 GO:0000796|GO:0007076
Ssu8g0759 628 MobiDBLite consensus disorder prediction 360 400 - -
Ssu8g0759 628 Pfam Condensin complex subunit 2 345 535 IPR022816 GO:0000796|GO:0007076
Ssu8g0759 628 Pfam Condensin complex subunit 2 573 620 IPR022816 GO:0000796|GO:0007076
Ssu8g0759 628 Pfam Condensin complex subunit 2 47 369 IPR022816 GO:0000796|GO:0007076
Ssu8g0759 628 PANTHER CONDENSIN COMPLEX SUBUNIT 2 33 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0759 Ssu-Chr8 12404826 12408448 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0759 K06676 - gmx:100777082 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0759 8 12404826 12408448 Ssu8g0759 8 12404826 12408448 ECH
Ssu8g0759 8 12404826 12408448 Ssu3g2274 3 72889058 72893721 PCT