Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0750 ATGGAGTTTCGGTTTCATCCAAAGCTCAACCGTCTTTTGTGCTTATTCATCCTTATCCTTTCATCTCTCCACACTCAAGCTACTACCTTCAGATACTGCACTGATATAAACTATGCCGTGAAGGTGTCTGGAGTTGAAATTACACCAGACCGTGCTGTGCGTGCTAGGCCTGTCACCTTTAAGATTTCAGCTGCTACTGGTGAACCTCTTTATGGGGGAAAGTGGGTAATTACAGTTGCATACTTTGGCTTTGTTGTCCATGCAGAAATTCATGATTTTTGTGAGGAAGTATCCTGTCCTGTTGCTATTGGCAGTTTTGTCGTAGCTCACACCCACAATTTTCCTGCATTTGCCCCACCGGGCACCTACACTGTTGAGATGACActaaaaaatgagaagaacGAGCCATTAACTTGCATCACCTTTAAATTCAAAATCGTTTTTGGATCTTTTGTGTCTGATATCTGA 468 0.4145 MEFRFHPKLNRLLCLFILILSSLHTQATTFRYCTDINYAVKVSGVEITPDRAVRARPVTFKISAATGEPLYGGKWVITVAYFGFVVHAEIHDFCEEVSCPVAIGSFVVAHTHNFPAFAPPGTYTVEMTLKNEKNEPLTCITFKFKIVFGSFVSDI 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0750 155 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 12 153 IPR039670 -
Ssu8g0750 155 SMART pgtp_13 30 144 IPR003172 -
Ssu8g0750 155 SUPERFAMILY E set domains 27 147 IPR014756 -
Ssu8g0750 155 Pfam ML domain 28 146 IPR003172 -
Ssu8g0750 155 Gene3D - 28 149 - -
Ssu8g0750 155 PANTHER LEGUMINOSIN GROUP578 SECRETED PEPTIDE 12 153 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0750 - - gmx:100818265 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0750 8 12251163 12253592 Ssu8g0750 8 12251163 12253592 ECH
Ssu8g0750 8 12251163 12253592 Ssu3g2288 3 73130780 73135870 PCT