Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0736 ATGTCAGCTTGTATGAGCAAGAAAATCCAAGGCCAATGCCTATCTAAATCTCAGGGCATTGTCACGATTTTGGGCTCTAACCACGAAGCCGCCACTTCTCTTCGACGGACTCTATCGGCAGACATGTCTTCCAAGAAATGGCTTTCTCAAAACGCCATGAAAAAGATCGCTTCCTCCGAAGAACTCTCTCACTCGCTCACAAAATCCACTGACTCATCATCCTCGTCAGAAGAAGACAACAGCGAAGAAACGAAGCAAGACGGGTTCCAAATTTGGAACACAATTCAAAAGGAGCAGCCAGGACAGTTTGAGGTGTGGAGCTCAATTTTGTCCCAAAAAGCCAACGAGGAAACCTCCAAATCAACCACCACTCCTTATGTTCACCCACTTGTGACAAGGTCAAAGAGCTGTCTGAGTGAAAAGAGTCTCGAGATATGCACGGAGGGTCTTGGATCTGAAACTGGCTCAGATGGGTTCTCTTCTTACCCATCATCCAAGACAGGGGATTcagaagaggaggaagaagaagaacaagaagaagaggaagagaaagtgCAAATTACACACGAGGAGGGGTTGCAAGTGCCAAAATACAACTATTCACCGAAGAAGTCCTTGCCTCGTTCTTTCCCTCCTCCACTCCCTTCACTCCACATGCGGTCACACCGTGACAACGGAAGGTTGTTCCTGCAAGCCGTGTCGGTTCCTTCACAGAACAACTTTTGTGCTCAACGAGAAAATGGTCGCCTTGTCCTCACCTTTGCTGACGTGGAAGTGCCTCAAGAGGGGGAAGATGAAGTGGTGGAGTTTGAGGAAGGTGACGAGGCAGAGGAAGTTGAGAGTGTGATAGAGCAAGCACCCATGTTGTTGTCTAGTGGGATTACACGTGTCCATAGGCTaacattaatgataaaaaataagtcaaTTGGGTTAGGTGACGCTAATAGGAATCCAAAATGGTCAGAGAAGTTCAACAATGTGGTCAATTTTAAGGATGTTGATGTGGTGCAAGTGCAACTTAGTTCACTTCCACCCTGGCCAAGGGCTAGGTTAATTCCCTCAGCTTCGGGTGTTTTCAATGCTTGTGAATACTGTTGGAGGACCAAGCCCGCGGCAAAAGCTGCCCCTAACAACTACTCATCCTTGGAGAACAATTTGAAGAGTTGCAAAGGTTCTAGGATGTCTTTTCTGTTCTGGGAACCGTATTGCATTGCTACCTGA 1221 0.448 MSACMSKKIQGQCLSKSQGIVTILGSNHEAATSLRRTLSADMSSKKWLSQNAMKKIASSEELSHSLTKSTDSSSSSEEDNSEETKQDGFQIWNTIQKEQPGQFEVWSSILSQKANEETSKSTTTPYVHPLVTRSKSCLSEKSLEICTEGLGSETGSDGFSSYPSSKTGDSEEEEEEEQEEEEEKVQITHEEGLQVPKYNYSPKKSLPRSFPPPLPSLHMRSHRDNGRLFLQAVSVPSQNNFCAQRENGRLVLTFADVEVPQEGEDEVVEFEEGDEAEEVESVIEQAPMLLSSGITRVHRLTLMIKNKSIGLGDANRNPKWSEKFNNVVNFKDVDVVQVQLSSLPPWPRARLIPSASGVFNACEYCWRTKPAAKAAPNNYSSLENNLKSCKGSRMSFLFWEPYCIAT 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0736 406 PANTHER PROTEIN FAF-LIKE, CHLOROPLASTIC 9 406 - -
Ssu8g0736 406 MobiDBLite consensus disorder prediction 57 87 - -
Ssu8g0736 406 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 9 406 IPR021410 -
Ssu8g0736 406 Coils Coil 170 191 - -
Ssu8g0736 406 MobiDBLite consensus disorder prediction 149 192 - -
Ssu8g0736 406 MobiDBLite consensus disorder prediction 57 74 - -
Ssu8g0736 406 MobiDBLite consensus disorder prediction 169 184 - -
Ssu8g0736 406 Pfam Fantastic Four meristem regulator 209 254 IPR046431 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0736 Ssu-Chr8 12119040 12120260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0736 - - gmx:100790085 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0736 8 12119040 12120260 Ssu8g0736 8 12119040 12120260 ECH
Ssu8g0736 8 12119040 12120260 Ssu3g2294 3 73226445 73227998 PCT