Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0709 atgatCCCACCCATGGATACGACTCCATCCTCATCAGACATAACCACCGTCCACCCCGACATCATCCAATCCCACATCCTCACCCGACTCGACGGCGCCGCCCTAGCCTCCGCCGCCTCCGCCACCTCCCACTTGCGCCGCCTCTGCACCGAACACCACCTCTGGCTGAACATCTGCGCCGCCACGTGGCCCTCCCTCACCGAACCCCTCGCCGCCGTCCTCATCGCCACCTTCCCCGCCGGCCACCGCTCCATCTTCTCCGACTCCTTCCCCTCCCTCCACTACTCCCCTCCTCCCGACCCCAGTCCCCACCCAACGCCGCCGGAGACGGCGGCGGAACTCGTCTCCGCCGTGGACCTCTTTTATAAGGGCAAACCCGTCTTTTCCCGCGTCATCCGAACCGAAACCGGCAAGGGCTGGTTCCTCTGCTCCCCACTCTGGGTGGACCTCCTCGACCCCAACGAGGTGGTCCCCACTCCCTTGAAATTCGCGCAAAACGACGAAGACCGGTGGCTGGCCCACCTCCAGGAGAATCTCGCTCTCAGCTGGATCATGATCGACCCGACCCGGAAACGCGCGGCGAACCTCTCCAGCCGGTGGCCAGTGGCGGCGCGGCGGCACTGGCTGACGGGGGAGCTGGAGGTGCTCTACGCTGTGGCCATGGAGACGGTCCAGTGCGTCGTGAAGGTCACGTGCTGCGGGAAGGCCGGGGGAGCGGTGCACGTGAGGGAGGTGAGTCTCACGATGGAGGACACGGAGGGGAGGCACGTGATGGGGAGGGACAGCGTCGTAATCTTGCGGGACGCGATGGAGAATGGGAAGAGAAAAAAACTGGACGCGAACGAAGCGAAGGAAGGGTACGAGAAGTTCTGCgtaatgaagagagagaaaagagagagaaagatgagGAGAGACAAGGCAATGGACACGATTGCCATGTTGGTCGCTTTCACCGTCTTCGCGTTTCTCTTCTGGTTCATGGCCTTCGGTGTTTGA 996 0.6114 MIPPMDTTPSSSDITTVHPDIIQSHILTRLDGAALASAASATSHLRRLCTEHHLWLNICAATWPSLTEPLAAVLIATFPAGHRSIFSDSFPSLHYSPPPDPSPHPTPPETAAELVSAVDLFYKGKPVFSRVIRTETGKGWFLCSPLWVDLLDPNEVVPTPLKFAQNDEDRWLAHLQENLALSWIMIDPTRKRAANLSSRWPVAARRHWLTGELEVLYAVAMETVQCVVKVTCCGKAGGAVHVREVSLTMEDTEGRHVMGRDSVVILRDAMENGKRKKLDANEAKEGYEKFCVMKREKRERKMRRDKAMDTIAMLVAFTVFAFLFWFMAFGV 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0709 331 PANTHER F-BOX PLANT-LIKE PROTEIN 11 325 - -
Ssu8g0709 331 PANTHER F-BOX PROTEIN-RELATED 11 325 IPR045283 -
Ssu8g0709 331 SUPERFAMILY F-box domain 9 80 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0709 Ssu-Chr8 11533798 11534793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0709 - - gmx:100794825 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0709 8 11533798 11534793 Ssu8g0709 8 11533798 11534793 ECH
Ssu8g0709 8 11533798 11534793 Ssu3g2324 3 74030077 74031286 PCT