Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2324 ATGATGGCTGCTACTCCTTCACCACCACCGGATAAAACCGAAAACAcagcatcatcatcatcatcatcatcaagttCATGCCTCACCACACTACACCCGGACATCATCCACACCCACATCCTCAAACGCCTCGACGGTGCCACGCTGGCATCCGCTGCGTCCGTATCATCCCTCATGCACCGCCTCTGCACCGAAGAGGATCTCTGGCGCGAAATCTGCACCGCCACGTGGCCCTCCTTGCGAGACCCCATCGCCCGCCACGTCATCTCCACCATCCCCGGCGGCCACCGTTCTATTTTCTCCGACGCCTACCCTTCGCTCCACCACTTCTCCCTCCGCCCCCACCGCcggccgccgccgccgccgccggaGCTCATCTCCGCCGTGGACATCTACTACCAGGGAAAGCCCGTGTTCTCCCGCGTGAAACGCACCGAAACACACAAGAACTGGTTCCTCACCTCGCCACTATGGGTGGACGCGCTCGAACCCAACGAGtTGATTCCCACGACGGTGAAGTTCGCGAGGAAGGATGAGGAATGGCTGAGGCACCTTGAGGAGAGTCTGAGCGTGAGCTGGATCGTAGTGGACCCGACGCGGGGGCGTGCGGCGAATGTGTCGAGCCGGAGGGCGGTGTTGGCGCGGCGGCACTGGCTGACGCGGGAGGTGGAGGTGGTGTACGCGGCGGAGATGGCGGGGGAGCGGCAGAGCGCGACGGAGAGGGTGCAGTGCGTGGTGAAGGTCACGTGCTGCGGGAAGGTTGGCGGGGAGCTGCACGTGAGGGGGGTGAATTTGGTGATGGAGGACACGGAGGGGAGGCAGGTGAGTGGGAAGGAGGGTGTGGCGATTCTGCAGAGGGCGATGGAGAGTggagaaaggaagagagtggACCACGTGGGGGTTAAAGAGAGGTTCGAGAAGTTCACGTGCTTGGTGAAGGAGAGCCGAGAGAGGAAGTTTAGGAGGGAGAAAGCGCGGGATGTTGTTTCTACGTTGCTGGCTTTAGTTGCTTTTCTCTTGGTTTGCTTCTTCGCTGGATTGTGA 1044 0.569 MMAATPSPPPDKTENTASSSSSSSSSCLTTLHPDIIHTHILKRLDGATLASAASVSSLMHRLCTEEDLWREICTATWPSLRDPIARHVISTIPGGHRSIFSDAYPSLHHFSLRPHRRPPPPPPELISAVDIYYQGKPVFSRVKRTETHKNWFLTSPLWVDALEPNELIPTTVKFARKDEEWLRHLEESLSVSWIVVDPTRGRAANVSSRRAVLARRHWLTREVEVVYAAEMAGERQSATERVQCVVKVTCCGKVGGELHVRGVNLVMEDTEGRQVSGKEGVAILQRAMESGERKRVDHVGVKERFEKFTCLVKESRERKFRREKARDVVSTLLALVAFLLVCFFAGL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2324 347 Gene3D - 15 151 - -
Ssu3g2324 347 PANTHER F-BOX PROTEIN-RELATED 24 342 IPR045283 -
Ssu3g2324 347 MobiDBLite consensus disorder prediction 1 26 - -
Ssu3g2324 347 MobiDBLite consensus disorder prediction 9 26 - -
Ssu3g2324 347 PANTHER F-BOX PLANT-LIKE PROTEIN 24 342 - -
Ssu3g2324 347 SUPERFAMILY F-box domain 21 97 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2324 Ssu-Chr3 74030077 74031286 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2324 - - ccaj:109798917 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2324 3 74030077 74031286 Ssu3g2324 3 74030077 74031286 ECH
Ssu8g0709 8 11533798 11534793 Ssu3g2324 3 74030077 74031286 PCT