Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0699 ATGGCCTTTGCTCAGGTTATCACGGTACTTCTTTTTGCATTAGCTCTAGCCAGAATTGGCCCCTCAGCATGCCAAACGGTAGAGGGCAAAGTCTCTTGCACTGACTGCACTCACAACTACGATTTCTCTGGCATTAAGTTGTCAGTGAAGTGTGAAGGCGTGAAAAACCTGGCTGTAGCGACCACAGAAGATAACGGCTTCTTCAAGGTTGACCTTCCCTCAGACCATACAAAGTCTCCCTCTGCGAACTGCTTTGCAAAACTTGTTGGGGGGCCAAATCACCTTTATGCCTCAAAGAAAAACCAGGTCTCCCAAATTGTCaagggaaaagagaaaagcacTTACACCATCTCCACTCCTCTTAGTTTCTTCACATCGTGTCCCCAAAACACAGAATGCAACAAGGCTGCCAACCTGTTCGGTTCATCCAAAACCTTTGATCTTCCTCTGCCTCCGGAGTGGGGTTTGGCACCCACTAGCTACTATGTTCCTTTCTTCCCCATCATCGGAATACCTTAG 519 0.4605 MAFAQVITVLLFALALARIGPSACQTVEGKVSCTDCTHNYDFSGIKLSVKCEGVKNLAVATTEDNGFFKVDLPSDHTKSPSANCFAKLVGGPNHLYASKKNQVSQIVKGKEKSTYTISTPLSFFTSCPQNTECNKAANLFGSSKTFDLPLPPEWGLAPTSYYVPFFPIIGIP 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0699 172 Pfam Pollen protein Ole e 1 like 27 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0699 Ssu-Chr8 11450293 11452125 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0699 - - gmx:100306432 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0699 8 11450293 11452125 Ssu8g0699 8 11450293 11452125 ECH
Ssu8g0699 8 11450293 11452125 Ssu3g2334 3 74174134 74174905 PCT